| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi5g12300.1 |
| Family | CE8 |
| Protein Properties | Length: 564 Molecular Weight: 61652.6 Isoelectric Point: 9.0973 |
| Chromosome | Chromosome/Scaffold: 5 Start: 15769392 End: 15771188 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 252 | 545 | 0 |
| AVVAKDGSGKFKSIQEAVNAMPKGHPGRYVIYVKTGLYDEIVMIPKDKVNIFMYGDGPKQSRVTGRKSFKDGITTMKTATFSIEAAGFICKNMGFHNTAG ADHHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVP DQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIADFVKPEGYMPWNGDFALKTLYYAEYANRGPGAGTSKRVNWPGFRVIGQKEAEQFTAGPFVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 564 Download |
| MAQKFLLGGV GAILVVAVVV GVVATVTRSG NKAGDNFTVP GEATLATSGK SVKSLCAPTL 60 YKESCEKTLT SASNGTENPK EVFSTVAKTA MESIKSAVER SKSIGEAKSS DPLTEGARQD 120 CKELLEDSVD DLKGMVEMAG GDIKVLLSRS DDLEHWITGV MTFIDTCADG FADEKLKADM 180 QGILRNATEL SSNALAITTS LGAIFKKLDL DVFKKDSSHR LLSEKEEQKF PQWMKSPERK 240 LLASGGMPAP NAVVAKDGSG KFKSIQEAVN AMPKGHPGRY VIYVKTGLYD EIVMIPKDKV 300 NIFMYGDGPK QSRVTGRKSF KDGITTMKTA TFSIEAAGFI CKNMGFHNTA GADHHQAVAL 360 RVQGDLAAFY NCRFDAFQDT LYVHARRQFF RNCVISGTID FIFGNSAAVF QNCLIITRRP 420 MDNQQNSVTA HGRTDPNMKS GLVIQNCRLV PDQKLFPDRF KIPSYLGRPW KEFSRLVIME 480 STIADFVKPE GYMPWNGDFA LKTLYYAEYA NRGPGAGTSK RVNWPGFRVI GQKEAEQFTA 540 GPFVDGATWL KFTGTPHYLG FKV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 4.0e-154 | 37 | 554 | 524 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 4.0e-158 | 29 | 556 | 544 | + pectinesterase | ||
| PLN02468 | PLN02468 | 5.0e-173 | 30 | 561 | 535 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 0 | 27 | 560 | 549 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 251 | 546 | 297 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF79975.1 | 0 | 28 | 562 | 27 | 562 | unknown [Zea mays] |
| EMBL | CAH67075.1 | 0 | 28 | 563 | 28 | 568 | OSIGBa0097P08.5 [Oryza sativa (indica cultivar-group)] |
| GenBank | EAY94388.1 | 0 | 28 | 563 | 28 | 568 | hypothetical protein OsI_16156 [Oryza sativa Indica Group] |
| GenBank | EAY94391.1 | 0 | 28 | 563 | 28 | 568 | hypothetical protein OsI_16158 [Oryza sativa Indica Group] |
| RefSeq | NP_001052981.1 | 0 | 28 | 563 | 28 | 568 | Os04g0458900 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 250 | 561 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 251 | 561 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 4e-26 | 251 | 470 | 5 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 4e-26 | 251 | 470 | 5 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 4e-26 | 251 | 470 | 5 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
