Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi5g16557.1 |
Family | GH3 |
Protein Properties | Length: 772 Molecular Weight: 83769.3 Isoelectric Point: 5.9509 |
Chromosome | Chromosome/Scaffold: 5 Start: 19901114 End: 19904942 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 71 | 322 | 0 |
AGVPRLGIPPYEWWSESLHGLADNGPGVNFSSGPVGAATIFPQVILSAASFNRSLWRAVAEAVAVEARAMHNAGQAGLTYWAPNINVFRDPRWGRGQETP GEDPAVIAAYSVEYVKGFQGEYGDGKEGRMMLSACCKHYVAYDLEKWGNFTRYTFNAKVNEQDFEDTYEPPFKSCIQEGRASCLMCSYNQVNGVPACARK DLLQKVRDEWGFQGYVVSDCDAVGIIYGYQNYTNSDEDSIAIVLKAGMDINC |
Full Sequence |
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Protein Sequence Length: 772 Download |
MYPPLLLLLV LLVARAGAGA AAPSNAHACA SAAANSYPFC DASLPFPVRA RALVSLLTLD 60 EKIAQLSNTA AGVPRLGIPP YEWWSESLHG LADNGPGVNF SSGPVGAATI FPQVILSAAS 120 FNRSLWRAVA EAVAVEARAM HNAGQAGLTY WAPNINVFRD PRWGRGQETP GEDPAVIAAY 180 SVEYVKGFQG EYGDGKEGRM MLSACCKHYV AYDLEKWGNF TRYTFNAKVN EQDFEDTYEP 240 PFKSCIQEGR ASCLMCSYNQ VNGVPACARK DLLQKVRDEW GFQGYVVSDC DAVGIIYGYQ 300 NYTNSDEDSI AIVLKAGMDI NCGSFLIRHT KSAIQKGKIT EEDINHALFN LFSVQLRLGL 360 FDKTSGNQWF TQLGPSNICT KEHRELAAEA ARQGTVLLKN DNSFLPLKRS EVSHIAIIGP 420 VANDAYIMGG DYTGVPCNPT TFLKGMQAVV PQTTIAAGCK DISCNSTDGF GEAIEVAKRA 480 DIVVLIAGLN LTQETEDLDR VSLLLPGKQM DLINSIASVT KKPLVLVITG GGPVDVSFAK 540 QDKRIASVLW IGYPGEVGGQ VLPEILFGEY NPGGKLPITW YPESFTAVPM NDMNMRADPS 600 RSYPGRTYRF YTGDVVYGFG YGLSYSKYSY NIIQAPTKIS LSRSSAVDFI STKRAHTRRD 660 GLDYVQVEDI ASCESIKFSV HISVANDGAM DGSHAVLLFT RSKSSVPGFP LKQLVGFERL 720 YAAAGKATNV EITVDPCKLM SSANTEGRRV LLLGSHLLMV GDEEHEFFME A* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 4.0e-50 | 70 | 433 | 378 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 9.0e-56 | 58 | 345 | 327 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-57 | 395 | 626 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 6.0e-72 | 106 | 740 | 692 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 36 | 771 | 741 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN26462.1 | 0 | 140 | 770 | 1 | 629 | unknown [Zea mays] |
EMBL | CAJ86207.1 | 0 | 25 | 771 | 26 | 738 | B1011H02.4 [Oryza sativa (indica cultivar-group)] |
GenBank | EEE61389.1 | 0 | 25 | 771 | 26 | 771 | hypothetical protein OsJ_15562 [Oryza sativa Japonica Group] |
RefSeq | NP_001053392.1 | 0 | 25 | 771 | 26 | 770 | Os04g0530700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448225.1 | 0 | 25 | 770 | 20 | 765 | hypothetical protein SORBIDRAFT_06g023450 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 106 | 739 | 88 | 701 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 3u48_A | 0 | 106 | 739 | 88 | 701 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 3u4a_B | 0 | 106 | 739 | 88 | 701 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 3u4a_A | 0 | 106 | 739 | 88 | 701 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1j8v_A | 5e-37 | 39 | 599 | 5 | 589 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |