y
Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi5g18940.1 |
Family | GT47 |
Protein Properties | Length: 482 Molecular Weight: 53269.9 Isoelectric Point: 8.0558 |
Chromosome | Chromosome/Scaffold: 5 Start: 22032639 End: 22034286 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 75 | 412 | 0 |
GGRVYVYDLPAVFNEDLLSLCDALAPWYSLCPYLANDGLGFPVEGSTGLSSILPDELLGSWYSSDQFALEHILHRRLLSHRCRTTDPARATAFFVPFYAG LAVGRHLWAANATDADRDRDCVALLSWLHAQPYYKRSSGWDHFLALGRITWDFRRGPEGGWGGSFLTMPGVANVTRFVIERDLEDAMDVGIPYPTGFHPR AAADMRAWQRHVSGFPRPKLFAFAGEPRSAIKGDFRAVLLKECQAAGAACGAMDCAEGKCVKKTELVQQLFMGARFCLQPRGDSYTRRSIFDCMVAGAVP VFFWRQTAYSSQYDWYLPADDGQEREWSVFIDPHELRA |
Full Sequence |
---|
Protein Sequence Length: 482 Download |
MAVMMHRPEP PNSAARRSRL VVNLLGAFFA IQLLLFIAFR SPPPTRAAPA AATDSSAVLV 60 PPPSRGAEDP SGCGGGRVYV YDLPAVFNED LLSLCDALAP WYSLCPYLAN DGLGFPVEGS 120 TGLSSILPDE LLGSWYSSDQ FALEHILHRR LLSHRCRTTD PARATAFFVP FYAGLAVGRH 180 LWAANATDAD RDRDCVALLS WLHAQPYYKR SSGWDHFLAL GRITWDFRRG PEGGWGGSFL 240 TMPGVANVTR FVIERDLEDA MDVGIPYPTG FHPRAAADMR AWQRHVSGFP RPKLFAFAGE 300 PRSAIKGDFR AVLLKECQAA GAACGAMDCA EGKCVKKTEL VQQLFMGARF CLQPRGDSYT 360 RRSIFDCMVA GAVPVFFWRQ TAYSSQYDWY LPADDGQERE WSVFIDPHEL RAGNLTVRGV 420 LAAIPEARVR QMRERVVEMV PRLVYAAADK DGLGSGMKDA VDVMVDGMLR RAAEQRRNWR 480 T* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 7.0e-53 | 73 | 424 | 364 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN35419.1 | 0 | 7 | 481 | 5 | 475 | unknown [Zea mays] |
EMBL | CAD41668.3 | 0 | 5 | 480 | 1 | 469 | OSJNBa0019K04.15 [Oryza sativa (japonica cultivar-group)] |
GenBank | EAY95237.1 | 0 | 5 | 481 | 1 | 470 | hypothetical protein OsI_17054 [Oryza sativa Indica Group] |
RefSeq | NP_001053616.1 | 0 | 5 | 480 | 4 | 472 | Os04g0574100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002446968.1 | 0 | 63 | 481 | 62 | 478 | hypothetical protein SORBIDRAFT_06g026020 [Sorghum bicolor] |