CAZyme Information

Basic Information
SpeciesBrachypodium distachyon
Cazyme IDBradi5g20718.1
FamilyGH16
Protein PropertiesLength: 317 Molecular Weight: 34229.1 Isoelectric Point: 4.4396
ChromosomeChromosome/Scaffold: 5 Start: 23495841 End: 23498456
Descriptionxyloglucan endotransglucosylase/hydrolase 13
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16552273.9e-23
  VEVLDGGRVVTLTLNNVSGGSGFQSKDAFLFGEFTMPMKLVPGDSAGTVTTFYLTSKDPTAEGDGHDEIDFEFLGNVSGEPYVMQTNVFARGVGNREQRF
  YLWFDPTADFHNYTILWNPLNIIFSVDGVAVRVFRNHERHGVPYLSGQAMKVHATIWNDDTWVTMGGRVKTDW
Full Sequence
Protein Sequence     Length: 317     Download
MARSSLLSAP AVAVATAAIA IACLATCSSA AAGGGNFYEN FVVAWGDDPD PGRRVEVLDG    60
GRVVTLTLNN VSGGSGFQSK DAFLFGEFTM PMKLVPGDSA GTVTTFYLTS KDPTAEGDGH    120
DEIDFEFLGN VSGEPYVMQT NVFARGVGNR EQRFYLWFDP TADFHNYTIL WNPLNIIFSV    180
DGVAVRVFRN HERHGVPYLS GQAMKVHATI WNDDTWVTMG GRVKTDWSHA PFVAAYGAYS    240
ATACVSSPAA ETSDEGGGSD CDGAAEEETS SWMARRLGPD GERAVAWARE KYMVMDYCDD    300
PWHLGRPAEC DIDRRV* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02175GH16_lichenase1.0e-1841185152+
cd02183GH16_fungal_CRH1_transglycosylase3.0e-2364236189+
pfam00722Glyco_hydro_163.0e-6537229194+
PLN03161PLN031612.0e-8736310281+
cd02176GH16_XET5.0e-13133310282+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAT94297.10143124286endotransglucosylase/hydrolase XTH5 [Triticum aestivum]
EMBLCAA63663.10143124285xyloglucan endotransglycosylase (XET) [Hordeum vulgare subsp. vulgare]
GenBankEEE61629.103031429298hypothetical protein OsJ_16064 [Oryza sativa Japonica Group]
RefSeqNP_001053791.103031429315Os04g0604900 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002306736.10183148284predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B03731617278A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme
PDB1un1_A03731617278A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme
PDB1umz_B03731617278A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A03731617278A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B05230129257A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Transmembrane Domains
StartEnd
1234
Signal Peptide
Cleavage Site
30
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CK162206282353130
EG375938264352980
CK162854257352880
DR740149253352870
CK162854232913130.002
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00011489mPavirv00022766mPavirv00032512m
Pavirv00011651mPavirv00065073mPavirv00039266mPavirv00018963mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015880.1Sb06g015940.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny