Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi5g23250.1 |
Family | GT8 |
Protein Properties | Length: 566 Molecular Weight: 64502.1 Isoelectric Point: 8.9468 |
Chromosome | Chromosome/Scaffold: 5 Start: 25248723 End: 25251113 |
Description | galacturonosyltransferase 10 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 225 | 538 | 0 |
CLGIRLTMEWFKSTELQRKFSDRSPAVQSNLRDNSLYHYCVFSDNIIAVSVVVNSTTLNSKHPEKIVFHLVTDEVNYAPMNAWFAMNDYRGAIVEIQKVE DFTWLNASYVPVLKQLQDAATQNFYFSGSGNRGTPIKFRNPKYLSMLNHLRFYIPEIYPELRKVVFLDDDIVVQKDLSDLFTINLNGNVMGAVETCMETF HRFHKYLNHSHPLIRAHFDPDACGWAFGMNVLDLVEWRNKNVTGIYHYWQERNADHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYTTVDPATIKEG AVLHYNGNMKPWLK |
Full Sequence |
---|
Protein Sequence Length: 566 Download |
MVRPAGLLDP TRRRPFLDQR RPSSFKRRWQ QRPLWARLAL SLVLALACVL LLLGLAGSPD 60 PSSPLSTVSS RSATTVSSPL LRQRSYLEGI TDTHNMTDEM LSAHSFSRQL MDQISLAKTY 120 IVAAKEASNL QFVAELSALV RREQSILAQA AAHGSMVVKE DAEKAIRDMS VLFFQAQQFR 180 YDSAVTIMKL KGQIQSLEEK SKAEADKSTK YGQIAAEELP KGLYCLGIRL TMEWFKSTEL 240 QRKFSDRSPA VQSNLRDNSL YHYCVFSDNI IAVSVVVNST TLNSKHPEKI VFHLVTDEVN 300 YAPMNAWFAM NDYRGAIVEI QKVEDFTWLN ASYVPVLKQL QDAATQNFYF SGSGNRGTPI 360 KFRNPKYLSM LNHLRFYIPE IYPELRKVVF LDDDIVVQKD LSDLFTINLN GNVMGAVETC 420 METFHRFHKY LNHSHPLIRA HFDPDACGWA FGMNVLDLVE WRNKNVTGIY HYWQERNADH 480 TLWKLGSLPP GLLAFYGLVE ALDPKWHVLG LGYTTVDPAT IKEGAVLHYN GNMKPWLKIG 540 MEKYKGFWDN YVDYSRPLLQ QCFMR* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 8.0e-124 | 108 | 562 | 459 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 9.0e-152 | 109 | 562 | 472 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02523 | PLN02523 | 4.0e-153 | 108 | 562 | 482 | + galacturonosyltransferase | ||
PLN02829 | PLN02829 | 1.0e-172 | 91 | 562 | 474 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 12 | 565 | 558 | + Probable galacturonosyltransferase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27553.1 | 0 | 12 | 565 | 2 | 555 | unknown [Zea mays] |
EMBL | CAH67658.1 | 0 | 12 | 563 | 2 | 554 | H0410G08.13 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC78094.1 | 0 | 12 | 563 | 2 | 554 | hypothetical protein OsI_17583 [Oryza sativa Indica Group] |
RefSeq | NP_001054014.1 | 0 | 12 | 563 | 2 | 554 | Os04g0636100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002447180.1 | 0 | 12 | 565 | 2 | 555 | hypothetical protein SORBIDRAFT_06g029980 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.0001 | 364 | 536 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.003 | 364 | 536 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.003 | 364 | 536 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |