CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10000070m
FamilyCBM20
Protein PropertiesLength: 1196 Molecular Weight: 131154 Isoelectric Point: 6.2865
ChromosomeChromosome/Scaffold: 6 Start: 9195393 End: 9201160
Descriptioncatalytics;carbohydrate kinases;phosphoglucan, water dikinases
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM20751595.2e-21
  KVKLNVRLDHQVNFGEHVAMFGSAKEIGSWKKKSPLNWTENGWVCELNLDGGQVLEYKFVIVKDDGSLSWESGDNRVLKLPNSGN
Full Sequence
Protein Sequence     Length: 1196     Download
MESIGSHHCC SSPFTFITRN SSSLPKLVNF TRRVHLSHQS SHRLRNSSSR LTCSAASSSS    60
TIEEQRKKED GSGTKVKLNV RLDHQVNFGE HVAMFGSAKE IGSWKKKSPL NWTENGWVCE    120
LNLDGGQVLE YKFVIVKDDG SLSWESGDNR VLKLPNSGNF SVVCHWDATR ETLDLPHEVG    180
GNDGGGEERG NHDVGDERVV GSENGAQLQK STLGGQWQGK DASFMRSNDH GNREVGRNWN    240
TTGLEGTALK MVEGDRNSKN WWRKLEMVRE VIVGTVEREE KLKALIYSAI YLKWINTGQI    300
PCFEDGGHHR PNRHAEISRL IFRELEHICS KKDASAEEVL VARKIHPCLP SFKAEFTAAV    360
PLTRIRDIAH RNDIPHDLKQ EIKHTIQNKL HRNAGPEDLI ATEAMLLRIT ETPGKYSGDF    420
VEQFKIFHNE LKDFFNAGSL TEQLDSMKIS MDDKGLSALS LFFECKKRLD SSGESTNVME    480
LIKTMHSLAS LRETIIKELN SGLRNDAPDT AIAMRQKWRL CEIGLEDYFF VLLSRFLNAL    540
ESMGGADQLA KDVASRKVAS WNDPLDALVL GVHQVGLSGW KQEECLAIGN ELLAWRERDL    600
LEKEGGEDGK TIWAMRLKAT LDRARRLTAE YSDLLLQIFP PNVEILGKAL GIPENSVKTY    660
TEAEIRAGII FQISKLCTVL LKAVRNSLGS EGWDVVVPGS TSGTLVQVES IVPGSLPATS    720
GGPIILLVNK ADGDEEVSAA NGNIAGVMLL QELPHLSHLG VRARQEKIVF VTCDDDEKVA    780
DIRRLVGKFV RLEASPSHVN LILSTEDRSR TPKFNANKKT DKNSLSKKKT DKRRIPIHDE    840
ESTPVSSSSD SLLYSSKDIP SGGIIALADA DVPTSGSKSA ACGLLASLAE ASSSVHSEHG    900
VPASFKVPTG VVIPFGSMEL ALKESNSEEK FASLLEKLET ARPEGGELDT ICDQIHEVMK    960
SLQVPEETIS SISKAFPKDA RLIVRSSANV EDLAGMSAAG LYESIPNVSP SDPLVFSDSV    1020
CQVWASLYTR RAVLSRRAAG VTQKEASMAV LVQEMLSPDL SFVLHTVSPA DPDSNLVEAE    1080
IAPGLGETLA SGTRGTPWRL ASGKLDGIVQ TLAFANFSEE LFVSGTGPAD GKYVRLTVDY    1140
SKKRLTVDSV FRQQLGQRLG SVGFFLERNF GCAQDVEGCL VGEDVYIVQS RPQPL*        1200
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
TIGR01418PEP_synth1.0e-229021193314+
cd05467CBM206.0e-247516698+
PRK06241PRK062411.0e-379031192295+
pfam01326PPDK_N5.0e-549031193294+
cd05818CBM20_water_dikinase2.0e-547516692+
Gene Ontology
GO TermDescription
GO:0003824catalytic activity
GO:0005524ATP binding
GO:0005975carbohydrate metabolic process
GO:0016301kinase activity
GO:0016310phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAU93516.101119511196chloroplast alpha-glucan water dikinase isoform 3 [Arabidopsis thaliana]
RefSeqNP_001119280.1018441845ATGWD3; carbohydrate kinase/ catalytic/ phosphoglucan, water dikinase [Arabidopsis thaliana]
RefSeqNP_198009.301119511196ATGWD3; carbohydrate kinase/ catalytic/ phosphoglucan, water dikinase [Arabidopsis thaliana]
RefSeqXP_002265211.101119411187PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002518612.10211194101174chloroplast alpha-glucan water dikinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2ols_A0.000000007871119516338A Chain A, The Crystal Structure Of The Phosphoenolpyruvate Synthase From Neisseria Meningitidis
PDB2vn7_A0.000000588155509583A Chain A, The Crystal Structure Of The Phosphoenolpyruvate Synthase From Neisseria Meningitidis
PDB2vn4_A0.000000588155509583A Chain A, Glycoside Hydrolase Family 15 Glucoamylase From Hypocrea Jecorina
PDB1kum_A0.000003741705108A Chain A, Glycoside Hydrolase Family 15 Glucoamylase From Hypocrea Jecorina
PDB1kul_A0.000003741705108A Chain A, Glycoside Hydrolase Family 15 Glucoamylase From Hypocrea Jecorina
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO77800089431611960
HO79474573746611960
EX05072028491011930
EV09382128391811960
HO794745454234670.000000005
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_045_00042.3Aquca_045_00042.2Aquca_045_00042.1Aquca_009_00054.3.18.103
Arabidopsis lyrata486949489476
Arabidopsis thalianaAT5G01260.2AT5G01260.1AT5G26570.2AT5G26570.1
Brachypodium distachyonBradi2g55380.3Bradi2g55380.2Bradi2g55380.1
Brassica rapaBra005693
Carica papayaevm.model.supercontig_112.34evm.model.supercontig_163.14
Capsella rubellaCarubv10001501mCarubv10001111m
Chlamydomonas reinhardtiiCre17.g719900.t1.2Cre17.g703000.t1.3Cre06.g269650.t1.2Cre12.g551200.t1.2g10103.t1
Cre02.g091750.t2.1Cre02.g091750.t1.2Cre02.g091750.t3.1Cre12.g492750.t1.3.499.578Cre12.g492750.t1.3.499.578
Cre09.g415600.t2.1Cre09.g415600.t1.3Cre12.g492750.t1.3.218.305Cre12.g492750.t1.3.218.305Cre10.g450500.t1.2
Citrus clementinaCiclev10011625mCiclev10011624mCiclev10011524mCiclev10011409mCiclev10005295m
Ciclev10005277mCiclev10004968mCiclev10010989m.24.109
Citrus sinensisorange1.1g012444morange1.1g012471morange1.1g015140morange1.1g002052m.24.109orange1.1g002050m.24.109
orange1.1g002027m.24.109
Cucumis sativusCucsa.176290.3Cucsa.176290.1
Eucalyptus grandisEucgr.K02988.2Eucgr.K02988.1Eucgr.K01679.1.16.104
Fragaria vescamrna18850.1-v1.0-hybrid
Glycine maxGlyma03g08980.1Glyma07g17931.1Glyma03g08820.1Glyma03g08930.1Glyma18g42781.1
Glyma03g08910.2Glyma1061s50.2Glyma1061s50.1Glyma03g08850.2Glyma03g08850.1
Glyma0165s00200.1Glyma01g28520.2Glyma01g28520.1Glyma03g08860.1Glyma03g08893.1
Glyma19g30580.1.16.102Glyma03g27600.1.16.103
Gossypium raimondiiGorai.006G181700.3Gorai.006G181700.2Gorai.006G181700.1Gorai.007G379100.3Gorai.007G379100.2
Gorai.007G379100.1Gorai.011G147600.3Gorai.011G147600.2Gorai.011G147600.1Gorai.010G128900.7.16.102
Gorai.010G128900.6.16.102
Linum usitatissimumLus10004826Lus10002495Lus10027767Lus10035528Lus10018226
Lus10041275Lus10031010.16.103Lus10035408.16.103
Malus domesticaMDP0000179937MDP0000520902MDP0000218204MDP0000256086MDP0000293128
MDP0000162900MDP0000149290.20.108
Manihot esculentacassava4.1_014927mcassava4.1_029798mcassava4.1_001086m.16.100
Medicago truncatulaMedtr4g015550.1Medtr7g088740.1.16.104
Mimulus guttatusmgv1a007499mmgv1a000923m.17.105
Oryza sativaLOC_Os01g63810.2LOC_Os01g63810.1LOC_Os05g37450.1LOC_Os07g46790.1.13.101
Panicum virgatumPavirv00009276mPavirv00009275mPavirv00011172mPavirv00049022mPavirv00069370m.17.104
Pavirv00069369m.17.104Pavirv00069371m.17.105
Physcomitrella patensPp1s127_37V6.1Pp1s103_94V6.2Pp1s103_94V6.1Pp1s49_209V6.2Pp1s49_209V6.1
Phaseolus vulgarisPhvul.010G002900.1Phvul.008G105500.1Phvul.001G117500.1
Picea abiesMA_10436655g0010
Populus trichocarpaPotri.009G044800.2Potri.009G044800.1Potri.016G114500.7Potri.016G114500.4Potri.016G114500.3
Potri.016G114500.2Potri.016G114500.1Potri.006G099200.3Potri.006G099200.2Potri.006G099200.1
Prunus persicappa007150mppa020714mppa000429mppa000782m.16.104
Ricinus communis29681.m00133229701.m00061530045.m000475.16.104
Setaria italicaSi002103mSi022447mSi028900m.11.98Si028839m.11.98Si034110m.17.104
Selaginella moellendorffii438530415024440606
Sorghum bicolorSb03g040350.1Sb09g021950.1Sb02g042100.1.13.100
Thellungiella halophilaThhalv10014134mThhalv10013736mThhalv10003634m
Vitis viniferaGSVIVT01033976001GSVIVT01025810001.16.103
Volvox carteriVocar20005575mVocar20005574mVocar20000733mVocar20001112mVocar20009467m
Vocar20004703m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)