Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10000208m |
Family | GT4 |
Protein Properties | Length: 851 Molecular Weight: 97953.3 Isoelectric Point: 5.9168 |
Chromosome | Chromosome/Scaffold: 6 Start: 7074984 End: 7078886 |
Description | sucrose synthase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 609 | 776 | 0 |
LKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEKYKLNGQFRWISSQMDRVRNGELYRYICDTKG AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED |
Full Sequence |
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Protein Sequence Length: 851 Download |
ECGKHKDFIL YYFHQILLFH LSLALQFTKE AFHCFCVSLF GSMANAERMI TRVHSQRERL 60 NETLVSERNE VLALLSRVEA KGKGILQQNQ IIAEFEALPE QTQKKLEGGA FFDLLKSTQE 120 AIVLPPWVAL AVRPRPGVWE YLRVNLHALV VEELQPSEFL HFKEELVDGV KNGDFTLELD 180 FEPFNASFPR PTLHKYIGDG VEFLNRHLSA KLFHDKESLL PLLKFLRLHS HQGKSLMLSE 240 KIQNLNRLQH VLRKAEEYLA ELKPETPYED FEAKFEEIGL ERGWGDNAER VLDMIRLLLD 300 LLEAPDPCTL ESFLGRVPMV FNVVILSPHG YFAQDNVLGY PDTGGQVVYI LDQVRALETE 360 MLQRIKQQGL NIKPRILILT RLLPDAVGTT CGERLERVYE SEYCDILRVP FRTEEGILRK 420 WISRFEVWPY LETYAEDAAV ELSKELDGKP DLIIGNYSDG NLVASLLAHK LGVTQCTIAH 480 ALEKTKYPDS DIYWKKLDEK YHFSCQFTAD IFAMNHTDFI ITSTFQEIAG SKETVGQYES 540 HTAFTLPGLY RVVHGIDVFD PKFNIVSPGA DMSIYFPYTE EKRRLTKFHS EIEELLYSDV 600 ENEEHLCVLK DKKKPILFTM ARLDRVKNLS GLVEWYGKNT RLRELANLVV VGGDRRKESK 660 DNEEKAEMKK MYDLIEKYKL NGQFRWISSQ MDRVRNGELY RYICDTKGAF VQPALYEAFG 720 LTVVEAMTCG LPTFATCKGG PAEIIVHGKS GFHIDPYHGD QAADTLADFF TKCKEDPSHW 780 DEISLGGLQR IEEKYTWQIY SQRLLTLTGV YGFWKHVSNL DRLEARRYLE MFYALKYRPL 840 AQAVPLAQDD * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 7.0e-66 | 323 | 807 | 494 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 2.0e-126 | 322 | 806 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 44 | 850 | 810 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 68 | 847 | 784 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 51 | 598 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACV72640.1 | 0 | 43 | 849 | 1 | 805 | sucrose synthase 1 [Gossypium hirsutum] |
EMBL | CAA50317.1 | 0 | 43 | 850 | 1 | 807 | sucrose synthase [Arabidopsis thaliana] |
RefSeq | NP_197583.1 | 0 | 43 | 850 | 1 | 808 | SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] |
RefSeq | NP_566865.2 | 0 | 43 | 850 | 1 | 808 | SUS4; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002324136.1 | 0 | 46 | 849 | 2 | 805 | hypothetical protein POPTRDRAFT_835735 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 43 | 850 | 1 | 808 | X Chain X, The Crystal Structure Of Pf-8, The Dna Polymerase Accessory Subunit From Kaposi's Sarcoma-associated Herpesvi |
PDB | 3s29_G | 0 | 43 | 850 | 1 | 808 | X Chain X, The Crystal Structure Of Pf-8, The Dna Polymerase Accessory Subunit From Kaposi's Sarcoma-associated Herpesvi |
PDB | 3s29_F | 0 | 43 | 850 | 1 | 808 | X Chain X, The Crystal Structure Of Pf-8, The Dna Polymerase Accessory Subunit From Kaposi's Sarcoma-associated Herpesvi |
PDB | 3s29_E | 0 | 43 | 850 | 1 | 808 | X Chain X, The Crystal Structure Of Pf-8, The Dna Polymerase Accessory Subunit From Kaposi's Sarcoma-associated Herpesvi |
PDB | 3s29_D | 0 | 43 | 850 | 1 | 808 | X Chain X, The Crystal Structure Of Pf-8, The Dna Polymerase Accessory Subunit From Kaposi's Sarcoma-associated Herpesvi |