Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10000252m |
Family | GH3 |
Protein Properties | Length: 804 Molecular Weight: 88151.3 Isoelectric Point: 6.5625 |
Chromosome | Chromosome/Scaffold: 6 Start: 3280147 End: 3284477 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 82 | 352 | 0 |
ASVPRLGIPPYEWWSESLHGIADNGPGVSFNGSISSATSFPQVIVSAASFNRTLWYEIGSAVAVEARAMYNGGQAGLTFWAPNINVFRDPRWGRGQETPG EDPKVVSEYGVEFVRGFQENRKRKVLKRRFGDGDDDDARYNDDGDDGKLMLSACCKHFTAYDLEKWGNFTRYDFNAVVTEQDMEDTYQPPFQSCITDGKA SCLMCSYNAVNGVPACAQEHLLKKARIEWGFEGYITSDCDAVATIFEYQGYTKSPEEAVADAIKAGVDINC |
Full Sequence |
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Protein Sequence Length: 804 Download |
FFVLSKKSMN PQLTLISLLF FTSAIAQTFK NIDSHPQFPC KPPHFSSYPF CNVSLSVKQR 60 AISLVSLLTL PEKIGQLSNT AASVPRLGIP PYEWWSESLH GIADNGPGVS FNGSISSATS 120 FPQVIVSAAS FNRTLWYEIG SAVAVEARAM YNGGQAGLTF WAPNINVFRD PRWGRGQETP 180 GEDPKVVSEY GVEFVRGFQE NRKRKVLKRR FGDGDDDDAR YNDDGDDGKL MLSACCKHFT 240 AYDLEKWGNF TRYDFNAVVT EQDMEDTYQP PFQSCITDGK ASCLMCSYNA VNGVPACAQE 300 HLLKKARIEW GFEGYITSDC DAVATIFEYQ GYTKSPEEAV ADAIKAGVDI NCGTYMLRNT 360 KSAILKGKVS EEQVDQALLN LFAVQLRLGL FDGDPREGLY AKLGSNDICS SDHRKLALEA 420 ARQGIVLLKN VHKLLPLNKN HVSSLAIVGP MANNISNMGG TYTGKPCQRT TLFTELLEYV 480 KKTSYASGCS DVSCDSDNGF REAVAIAKGA DYVIVVAGLD LSQETEDKDR FSLSLPGKQK 540 DLVSSVAAVS KKPVILVLTG GGPVDVTFAK TDPRIGSIIW IGYPGETGGQ ALAEIIFGDF 600 NPGGRLPMTW YPESFTDVAM SDMHMRADSS RGYPGRTYRF YTGPQVYSFG AGLSYTKFDY 660 KITSAPTRLS LSALVPKQSS HKKLIIQGEE QLRFLQLDDA TVNSCESLRF NVQVNVSNSG 720 EIDGSHVLML FSKMPQVISG VPEKQLIGFD RVHVRSKEMI ETVLVIDPCK HLIVANDVGK 780 RVIPLGIHVL SLGDLQHSLS LEF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-55 | 425 | 656 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-59 | 81 | 463 | 392 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 4.0e-61 | 69 | 377 | 340 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 6.0e-77 | 119 | 768 | 694 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 9 | 803 | 796 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC41913.1 | 0 | 70 | 803 | 2 | 732 | putative beta-xylosidase [Arabidopsis thaliana] |
EMBL | CBI25718.1 | 0 | 34 | 802 | 26 | 767 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196618.1 | 0 | 9 | 803 | 1 | 792 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264031.1 | 0 | 34 | 803 | 26 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299457.1 | 0 | 34 | 803 | 26 | 779 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 119 | 768 | 91 | 698 | A Chain A, Solution Structure Of The Josephin Domain Of Ataxin-3 In Complex With Ubiquitin Molecule. |
PDB | 3u48_A | 0 | 119 | 768 | 91 | 698 | A Chain A, Solution Structure Of The Josephin Domain Of Ataxin-3 In Complex With Ubiquitin Molecule. |
PDB | 3u4a_B | 0 | 119 | 768 | 91 | 698 | A Chain A, Solution Structure Of The Josephin Domain Of Ataxin-3 In Complex With Ubiquitin Molecule. |
PDB | 3u4a_A | 0 | 119 | 768 | 91 | 698 | A Chain A, Solution Structure Of The Josephin Domain Of Ataxin-3 In Complex With Ubiquitin Molecule. |
PDB | 2x41_A | 3e-37 | 59 | 776 | 14 | 683 | A Chain A, Solution Structure Of The Josephin Domain Of Ataxin-3 In Complex With Ubiquitin Molecule. |