| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10000417m |
| Family | GH127 |
| Protein Properties | Length: 656 Molecular Weight: 74074.1 Isoelectric Point: 7.0143 |
| Chromosome | Chromosome/Scaffold: 6 Start: 4091359 End: 4095849 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH127 | 360 | 634 | 2.3e-26 |
| PLHKEISMFFMDIVNASHSYATGGTSVTEFWQDPKRMATTLQNENEESCTTYNMLKVSRNLFRWTKEVSYADYYERALTNGVLGIQRGTQPGLMIYMLPL GKGVSKAVTYHGWGTPYDAFWCCYGTGIESFSKLGDSIYFQEDGESPALYVTQYISSLLDWKSSGLLLSQKVKPVVSWDPYMRVTFSFSSSKGGMGKETT LNLRIPVWTNSVGAKVSLNGQSLKVPASGNFLSIKQNWKSGDQLTMELPLSIRTEAIKDDRQEYSSLHAILYGPY | |||
| Full Sequence |
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| Protein Sequence Length: 656 Download |
| MDTMKKSGLI IKIALLYTSF VLVCVAKECT NTPTQLASHT FRYDLLQSKN ETLKTELFSH 60 YHLTPTDDAA WSSLLPRKML REEEDEFGWT MLYRKFKDSN SSGNFLKDVS LHDVRLDPES 120 FHWRAQQTNL EYLLMLDVDG LAWSFRKEAG LDAPGNYYGG WERPDSELRG HFVGHYLSAT 180 AYMWASTHND TLKAKMSALV SALSECQQKV GTGYLSAFPS SFFDRFEAIK PVWAPYYTIH 240 KILAGLVDQY KLAGNSQALK MATGMADYFY VRVRNVIRNY SVERHWLSLN EETGGMNDVL 300 YQLYSITGDS KYLLLAHLFD KPCFLGVLAI QADDISGFHS NTHIPIVIGS QQRYEITGDP 360 LHKEISMFFM DIVNASHSYA TGGTSVTEFW QDPKRMATTL QNENEESCTT YNMLKVSRNL 420 FRWTKEVSYA DYYERALTNG VLGIQRGTQP GLMIYMLPLG KGVSKAVTYH GWGTPYDAFW 480 CCYGTGIESF SKLGDSIYFQ EDGESPALYV TQYISSLLDW KSSGLLLSQK VKPVVSWDPY 540 MRVTFSFSSS KGGMGKETTL NLRIPVWTNS VGAKVSLNGQ SLKVPASGNF LSIKQNWKSG 600 DQLTMELPLS IRTEAIKDDR QEYSSLHAIL YGPYLLAGHT SRDWSITTQA TKPSQ* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 4.0e-70 | 111 | 643 | 543 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 0 | 113 | 637 | 533 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB88260.1 | 0 | 27 | 650 | 24 | 647 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_196799.1 | 0 | 27 | 655 | 25 | 652 | catalytic [Arabidopsis thaliana] |
| RefSeq | NP_196800.2 | 0 | 27 | 650 | 29 | 652 | catalytic [Arabidopsis thaliana] |
| RefSeq | XP_002297785.1 | 0 | 8 | 646 | 3 | 638 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304762.1 | 0 | 9 | 648 | 5 | 639 | predicted protein [Populus trichocarpa] |
