| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10000466m |
| Family | GH3 |
| Protein Properties | Length: 625 Molecular Weight: 67977.8 Isoelectric Point: 9.5116 |
| Chromosome | Chromosome/Scaffold: 6 Start: 7133294 End: 7137443 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH3 | 104 | 337 | 0 |
| STRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGVTRDPNLLKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDYRIVQQMTEIIPGLQG DLPTKRRGVPFVGGKSKVAACAKHFVGDGGTVRGIDENNTVIDAKGLFGIHMPGYYNAVNKGVATIMVSYSAWNGLRMHANKELVTGFLKNKLKFRGFVI SDWQGIDRITNPAHLNYSYSVYAGISAGIDMIMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 625 Download |
| MGTLSKVLCL VLLCCAVAAA EGTLKYKDPK QPLGARIRDL MNRMTLQEKI GQMVQIERSV 60 ATPEVMQKYF IGSVLSGGGS VPSEKATPET WVNMVNGIQK ASLSTRLGIP MIYGIDAVHG 120 HNNVYGATIF PHNVGLGVTR DPNLLKRIGE ATALEVRATG IPYAFAPCIA VCRDPRWGRC 180 YESYSEDYRI VQQMTEIIPG LQGDLPTKRR GVPFVGGKSK VAACAKHFVG DGGTVRGIDE 240 NNTVIDAKGL FGIHMPGYYN AVNKGVATIM VSYSAWNGLR MHANKELVTG FLKNKLKFRG 300 FVISDWQGID RITNPAHLNY SYSVYAGISA GIDMIMVPYN YTEFIDEINS QIQKKLIPIS 360 RIDDAVKRIL RVKFTMGLFE EPLADLSFAN QLGSKEHREL AREAVRKSLV LLKNGKKGAK 420 PLLPLPKKTG KILVAGTHAD NLGYQCGGWT ITWQGLKGND HTVGTTILAA VKNTVAPTTQ 480 VVFNENPDAN FVKSGKFDYA IVVVGEPPYA EMFGDSTNLT ISDPGPSTIR NVCGSMKCVV 540 VVVSGRPVVI QPYVSTIDAL VAAWLPGTEG QGVADALFGD YGFTGKLART WFKSVKQLPM 600 NVGDLHYDPL YPFGFGLTTK PYKV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 5.0e-30 | 32 | 622 | 653 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 1.0e-31 | 434 | 618 | 204 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 1.0e-61 | 29 | 618 | 659 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 3.0e-72 | 44 | 477 | 441 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-87 | 45 | 372 | 332 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ17461.1 | 0 | 24 | 621 | 26 | 624 | beta-D-glucosidase [Gossypium hirsutum] |
| EMBL | CAA07070.1 | 0 | 10 | 621 | 12 | 625 | beta-D-glucosidase [Tropaeolum majus] |
| RefSeq | NP_197595.2 | 0 | 1 | 624 | 1 | 624 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002313632.1 | 0 | 1 | 623 | 1 | 626 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523935.1 | 0 | 24 | 623 | 30 | 631 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 26 | 623 | 5 | 603 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1iex_A | 0 | 26 | 623 | 5 | 603 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1iew_A | 0 | 26 | 623 | 5 | 603 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1iev_A | 0 | 26 | 623 | 5 | 603 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1ieq_A | 0 | 26 | 623 | 5 | 603 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
