Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10000558m |
Family | CE8 |
Protein Properties | Length: 583 Molecular Weight: 64354.2 Isoelectric Point: 8.7557 |
Chromosome | Chromosome/Scaffold: 6 Start: 15663028 End: 15665435 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 268 | 563 | 0 |
VTVSQNGTGNFTTITEALTAAPNKTDGTAGYFVIYVTSGVYEENVVIAKNKRYLMMIGDGINRTVVTGNRNVVDGWTTFNSATFAVTSPNFVAVNMTFRN TAGPEKHQAVALRSSADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCT IRPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYMDGFVEPVGWREWNGDFALSTLYYAEYNNTGSGSNTTDRVVWPGFHVINSTDANNFTVSNFL |
Full Sequence |
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Protein Sequence Length: 583 Download |
MQSPNLILLT LFLSLQTLSI VSQDLLPSTS NTSSTICKTT PDPQFCKSVF PQTSQGDVRE 60 YGRFSLRKSL SQSQKFTRTI DKYLKRNNAL LSKSAVGALQ DCRYLASLTT DYLITSFDTV 120 NVNASSSKTL SFSKADEIQT LLSAALTNEQ TCLDGINTAA SSSWTIRNGV ALPLIKDTKL 180 FSVSLALFTK GWVPKKKKQG ATTTTGYSWA YPKSSTHTHA NPFRHFRNGA LPLKMTGHTR 240 AVYESLSRRK LADGDENDGN TVLVSDIVTV SQNGTGNFTT ITEALTAAPN KTDGTAGYFV 300 IYVTSGVYEE NVVIAKNKRY LMMIGDGINR TVVTGNRNVV DGWTTFNSAT FAVTSPNFVA 360 VNMTFRNTAG PEKHQAVALR SSADLSIFYS CSFEAYQDTL YTHSLRQFYR ECDIYGTVDF 420 IFGNAAVVFQ NCNLYPRQPM QNQFNAITAQ GRTDPNQNTG ISIHNCTIRP ADDLVSSNYT 480 VKTYLGRPWK EYSRTVFMQS YMDGFVEPVG WREWNGDFAL STLYYAEYNN TGSGSNTTDR 540 VVWPGFHVIN STDANNFTVS NFLLGDGWMV QSGVPYLSGL LS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 2.0e-144 | 21 | 580 | 568 | + pectinesterase | ||
PLN02468 | PLN02468 | 2.0e-146 | 28 | 580 | 561 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 23 | 582 | 560 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 32 | 581 | 564 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 268 | 566 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL87311.1 | 0 | 1 | 582 | 1 | 573 | unknown protein [Arabidopsis thaliana] |
DDBJ | BAF00855.1 | 0 | 1 | 582 | 1 | 579 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_563662.1 | 0 | 1 | 582 | 1 | 579 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_567227.1 | 0 | 1 | 582 | 1 | 573 | ATPMEPCRB; pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002523112.1 | 0 | 19 | 581 | 26 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 270 | 580 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 268 | 580 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 2e-23 | 267 | 535 | 7 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 2e-23 | 267 | 535 | 7 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 2e-23 | 267 | 535 | 7 | 311 | A Chain A, Pectin Methylesterase From Carrot |