Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10000596m |
Family | AA1 |
Protein Properties | Length: 564 Molecular Weight: 62396.4 Isoelectric Point: 9.4267 |
Chromosome | Chromosome/Scaffold: 6 Start: 1574288 End: 1576536 |
Description | laccase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 24 | 549 | 0 |
AKVQHHDFVIQETPVKRLCKTRNVITVNGMFPGPTLEVNNGDTLEVKVHNRARYNITIHWHGVRQIRTGWADGPEFVTQCPIRPGKSYTYRFTIQGQEGT LWWHAHSSWLRATVYGALIIHPTPGSSFPFPKPDRQTALVLGEWWNANPVDVINQAIRTGAAPNISDAYTINGQPGDLYNCSTKETIVVPTKSGETSLLR VINAALNQPLFFSVANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLLTADQPPKRYYIAARAYQSAQNAPFDNTTTTGILQYKKTTSPPILPVLPAFN DTNTVTSFSRKFKSLRNVVVPKTIDDDLFFTVGLGLDNCPKNFPKSRCQGLNGTRFTASMNNVSFVLPSNFSLLQAHSNGIPGVFTTDFPAKPPVQFDYT GNNISRALFQPVKGTKLYKLKYGSRVQVVLQDTNIVTSENHPIHLHGYDFYIVGEGFGNFNPKKDTSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGVW LMHCHLDVHIKWGLAMAFLVDNGVGE |
Full Sequence |
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Protein Sequence Length: 564 Download |
MKTVHSFSFL LFFCSLLSAS STIAKVQHHD FVIQETPVKR LCKTRNVITV NGMFPGPTLE 60 VNNGDTLEVK VHNRARYNIT IHWHGVRQIR TGWADGPEFV TQCPIRPGKS YTYRFTIQGQ 120 EGTLWWHAHS SWLRATVYGA LIIHPTPGSS FPFPKPDRQT ALVLGEWWNA NPVDVINQAI 180 RTGAAPNISD AYTINGQPGD LYNCSTKETI VVPTKSGETS LLRVINAALN QPLFFSVANH 240 KLTVVGADAS YLKPFTTKVL MLGPGQTTDV LLTADQPPKR YYIAARAYQS AQNAPFDNTT 300 TTGILQYKKT TSPPILPVLP AFNDTNTVTS FSRKFKSLRN VVVPKTIDDD LFFTVGLGLD 360 NCPKNFPKSR CQGLNGTRFT ASMNNVSFVL PSNFSLLQAH SNGIPGVFTT DFPAKPPVQF 420 DYTGNNISRA LFQPVKGTKL YKLKYGSRVQ VVLQDTNIVT SENHPIHLHG YDFYIVGEGF 480 GNFNPKKDTS KFNLVDPPLR NTVAVPVNGW AVIRFVADNP GVWLMHCHLD VHIKWGLAMA 540 FLVDNGVGEL ETLEAPPHDL PVC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 2.0e-77 | 42 | 541 | 535 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 3.0e-85 | 24 | 541 | 555 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-95 | 42 | 541 | 540 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 24 | 563 | 546 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 20 | 563 | 2 | 550 | unknown [Populus trichocarpa] |
EMBL | CBI25418.1 | 0 | 22 | 563 | 29 | 577 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196158.1 | 0 | 1 | 563 | 1 | 565 | LAC12 (laccase 12); laccase [Arabidopsis thaliana] |
RefSeq | XP_002315131.1 | 0 | 5 | 563 | 12 | 575 | laccase 90c [Populus trichocarpa] |
RefSeq | XP_002520796.1 | 0 | 24 | 563 | 32 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 24 | 541 | 1 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asq_A | 0 | 24 | 541 | 1 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_B | 0 | 24 | 541 | 1 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_A | 0 | 24 | 541 | 1 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1aso_B | 0 | 24 | 541 | 1 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |