| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10000656m |
| Family | GH1 |
| Protein Properties | Length: 542 Molecular Weight: 61809.4 Isoelectric Point: 6.083 |
| Chromosome | Chromosome/Scaffold: 6 Start: 9054521 End: 9057366 |
| Description | thioglucoside glucohydrolase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 42 | 512 | 0 |
| KSFGDKFIFGVASSAYQIEGGRGRGVNVWDGFTHRYPEKGGADLKNGDTTCDSYTYWQKDIDVMGELNATGYRFSLAWSRIIPKGKRSRGVNQDGIDYYN GLIDGLIARNITPFVTLYHWDLPQTLQDEYEGFLDRTIIDDFKDFADLCFEKFGDRVKHWITINQLYTVPTRGYAIATDAPGRCSPKIDKRCYGGNSSTE PYIVAHNQLLAHAVAVDLYRTKYKNQGGMIGPVMITRWFLPFDDTQESKDATERSKEFFHGWFMEPLTQGKYPQIMIDLVGDRLPTFNETEAKLVKGSYD FLGLNYYVTQYAQNNDTIVPSDVHTAMMDSKATLTAKNSKGEAPGPMFNANTYYYPRGIYYVMEYFKNKYGDPLIYITENGISSPGDQTFDESIADYKRI DYLCSHLCFLRKVIREKNVNVRGYFAWSLGDNYEFCNGFTVRFGLSYVDFNNVTADRDLKASGKWFQQFIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 542 Download |
| MKFQWLALVF LLAMATCKGK EEYICEENEP FHCNQTSRFN GKSFGDKFIF GVASSAYQIE 60 GGRGRGVNVW DGFTHRYPEK GGADLKNGDT TCDSYTYWQK DIDVMGELNA TGYRFSLAWS 120 RIIPKGKRSR GVNQDGIDYY NGLIDGLIAR NITPFVTLYH WDLPQTLQDE YEGFLDRTII 180 DDFKDFADLC FEKFGDRVKH WITINQLYTV PTRGYAIATD APGRCSPKID KRCYGGNSST 240 EPYIVAHNQL LAHAVAVDLY RTKYKNQGGM IGPVMITRWF LPFDDTQESK DATERSKEFF 300 HGWFMEPLTQ GKYPQIMIDL VGDRLPTFNE TEAKLVKGSY DFLGLNYYVT QYAQNNDTIV 360 PSDVHTAMMD SKATLTAKNS KGEAPGPMFN ANTYYYPRGI YYVMEYFKNK YGDPLIYITE 420 NGISSPGDQT FDESIADYKR IDYLCSHLCF LRKVIREKNV NVRGYFAWSL GDNYEFCNGF 480 TVRFGLSYVD FNNVTADRDL KASGKWFQQF INVSSNDPAD QDLLSSSLSS KNRDRKSLAD 540 A* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02849 | PLN02849 | 7.0e-116 | 36 | 521 | 495 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 1.0e-117 | 39 | 522 | 493 | + beta-glucosidase | ||
| COG2723 | BglB | 5.0e-119 | 42 | 511 | 480 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 8.0e-128 | 46 | 507 | 473 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 0 | 42 | 512 | 479 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL06896.1 | 0 | 1 | 541 | 1 | 541 | AT5g26000/T1N24_7 [Arabidopsis thaliana] |
| GenBank | AAL25596.1 | 0 | 1 | 541 | 1 | 541 | AT5g26000/T1N24_7 [Arabidopsis thaliana] |
| EMBL | CAH40827.1 | 0 | 21 | 497 | 3 | 479 | thioglucoside glucohydrolase [Arabidopsis lyrata subsp. lyrata] |
| RefSeq | NP_568479.1 | 0 | 1 | 539 | 12 | 547 | TGG2 (GLUCOSIDE GLUCOHYDROLASE 2); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase [Arabidopsis thaliana] |
| RefSeq | NP_851077.1 | 0 | 1 | 541 | 1 | 541 | TGG1 (THIOGLUCOSIDE GLUCOHYDROLASE 1); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1myr_A | 0 | 21 | 512 | 2 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 2wxd_M | 0 | 21 | 512 | 2 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1w9d_M | 0 | 21 | 512 | 2 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1w9b_M | 0 | 21 | 512 | 2 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1e73_M | 0 | 21 | 512 | 2 | 500 | A Chain A, Myrosinase From Sinapis Alba |
