| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10000741m |
| Family | GH9 |
| Protein Properties | Length: 515 Molecular Weight: 57265.3 Isoelectric Point: 9.4432 |
| Chromosome | Chromosome/Scaffold: 6 Start: 15681032 End: 15683395 |
| Description | glycosyl hydrolase 9B13 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 50 | 504 | 0 |
| NYKDALTKSILFFEGQRSGKLPPNQRMTWRKNSGLSDGSALHVDLVGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGGLMKSELQNAKTAIRWATDYLLK ATSHPETIYVQVGDANKDHSCWERPEDMDTVRSVFKVDKNTPGSDVAAETAAALAAAAIVFRKSDPSYSKVLLKRAISVFAFADKYRGTYSAGLKPDVCP FYCSYSGYQDELLWGAAWLQKATKNLKYLNYIKVNGQILGAAEYDNTFGWDNKHAGARILLTKAFLVQNVKTLHEYKGHADNFICSVIPGAPFSSTQYTP GGLLFKMADANMQYVTSTSFLLLTYAKYLTSAKTVVHCGGSVYTPGRLRIIAKRQVDYLLGDNPLRMSYMVGYGPKFPRRIHHRGSSLPCVASHPAKIQC HQGFAIMNSQSPNPNFLVGAVVGGPDQHDRFPDKRSDYEQSEPATYINAPLVGAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 515 Download |
| MALLLFSSSS YAFRVTIFLS FFFFLCNGFS YPTSSLYYTH HHRHHLAKHN YKDALTKSIL 60 FFEGQRSGKL PPNQRMTWRK NSGLSDGSAL HVDLVGGYYD AGDNIKFGFP MAFTTTMLSW 120 SVIEFGGLMK SELQNAKTAI RWATDYLLKA TSHPETIYVQ VGDANKDHSC WERPEDMDTV 180 RSVFKVDKNT PGSDVAAETA AALAAAAIVF RKSDPSYSKV LLKRAISVFA FADKYRGTYS 240 AGLKPDVCPF YCSYSGYQDE LLWGAAWLQK ATKNLKYLNY IKVNGQILGA AEYDNTFGWD 300 NKHAGARILL TKAFLVQNVK TLHEYKGHAD NFICSVIPGA PFSSTQYTPG GLLFKMADAN 360 MQYVTSTSFL LLTYAKYLTS AKTVVHCGGS VYTPGRLRII AKRQVDYLLG DNPLRMSYMV 420 GYGPKFPRRI HHRGSSLPCV ASHPAKIQCH QGFAIMNSQS PNPNFLVGAV VGGPDQHDRF 480 PDKRSDYEQS EPATYINAPL VGALSYFAHA YGQL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02266 | PLN02266 | 0 | 31 | 514 | 485 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 47 | 509 | 464 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 50 | 505 | 462 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 47 | 508 | 465 | + cellulase | ||
| PLN02175 | PLN02175 | 0 | 47 | 508 | 463 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC16418.1 | 0 | 1 | 510 | 1 | 501 | endo-1,4-beta glucanase [Arabidopsis thaliana] |
| RefSeq | NP_192138.1 | 0 | 1 | 514 | 1 | 516 | AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002271736.1 | 0 | 18 | 514 | 24 | 511 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301487.1 | 0 | 6 | 514 | 1 | 511 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002523114.1 | 0 | 46 | 514 | 42 | 510 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 49 | 505 | 3 | 426 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 1ksc_A | 0 | 49 | 505 | 3 | 426 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 1ks8_A | 0 | 49 | 505 | 3 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 50 | 512 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 50 | 512 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
