Basic Information | |
---|---|
Species | Capsella rubella |
Cazyme ID | Carubv10000862m |
Family | GT28 |
Protein Properties | Length: 477 Molecular Weight: 53323.2 Isoelectric Point: 6.4011 |
Chromosome | Chromosome/Scaffold: 6 Start: 6927012 End: 6929148 |
Description | monogalactosyldiacylglycerol synthase 2 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT28 | 285 | 443 | 1.4e-30 |
VLLMGGGEGMGPVKETAKALEEALYDTENKKPIGQMVVICGRNKKLASALEATEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAESLIRSLPIILN DYIPGQEKGNVPYVVENGAGVFTRSPKETARIVGEWFSTKTDELENTSGNARKLAQPEA |
Full Sequence |
---|
Protein Sequence Length: 477 Download |
MATTVMSLAE KVLERVYGTS KSAVTVAAGD GEMTTPRHTH HHIHRVKSYD DSDDDFCHSD 60 EDESAMELVQ IGAERTKNVL ILMSDTGGGH RASAEAIRDA FKIEFGDKYR VIVKDVWKEY 120 TGWPLNDMER SYKFMVKHVQ LWKVAFHSTS PKWIHSCYLA AIAAYYAKEV EAGLMEYKPE 180 IIISVHPLMQ HIPLWVLKWQ ELQKRVLFVT VITDLNTCHP TWFHPGVNRC YCPSQEVAKR 240 ALTDGLDESQ VRVFGLPVRP SFARAVLVKD DLRKELEMDQ DLRAVLLMGG GEGMGPVKET 300 AKALEEALYD TENKKPIGQM VVICGRNKKL ASALEATEWK IPVKVRGFET QMEKWMGACD 360 CIITKAGPGT IAESLIRSLP IILNDYIPGQ EKGNVPYVVE NGAGVFTRSP KETARIVGEW 420 FSTKTDELEN TSGNARKLAQ PEAVFDIVKD IDELSEQRGP LAKVSYTLTS SFASLV* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0707 | MurG | 7.0e-23 | 80 | 457 | 399 | + UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
PRK13608 | PRK13608 | 3.0e-34 | 75 | 451 | 391 | + diacylglycerol glucosyltransferase; Provisional | ||
PRK13609 | PRK13609 | 4.0e-44 | 75 | 463 | 402 | + diacylglycerol glucosyltransferase; Provisional | ||
pfam06925 | MGDG_synth | 8.0e-82 | 90 | 258 | 169 | + Monogalactosyldiacylglycerol (MGDG) synthase. This family represents a conserved region of approximately 180 residues within plant and bacterial monogalactosyldiacylglycerol (MGDG) synthase (EC:2.4.1.46). In Arabidopsis, there are two types of MGDG synthase which differ in their N-terminal portion: type A and type B. | ||
PLN02605 | PLN02605 | 0 | 79 | 458 | 382 | + monogalactosyldiacylglycerol synthase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0009247 | glycolipid biosynthetic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030246 | carbohydrate binding |
GO:0030259 | lipid glycosylation |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK50066.1 | 0 | 83 | 476 | 1 | 394 | AF372926_1 AT5g20410/F5O24_300 [Arabidopsis thaliana] |
RefSeq | NP_568394.2 | 0 | 1 | 476 | 1 | 468 | MGD2; 1,2-diacylglycerol 3-beta-galactosyltransferase/ UDP-galactosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002263443.1 | 0 | 61 | 476 | 38 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324614.1 | 0 | 66 | 476 | 64 | 474 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530758.1 | 0 | 66 | 476 | 60 | 470 | 1,2-diacylglycerol 3-beta-galactosyltransferase, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EX529759 | 307 | 129 | 435 | 0 |
HO466477 | 378 | 77 | 454 | 0 |
GO845052 | 299 | 174 | 472 | 0 |
HO604323 | 393 | 73 | 454 | 0 |
DK481520 | 250 | 65 | 314 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|