| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10000946m |
| Family | GT14 |
| Protein Properties | Length: 450 Molecular Weight: 51720.1 Isoelectric Point: 8.4286 |
| Chromosome | Chromosome/Scaffold: 6 Start: 15241744 End: 15244307 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 105 | 361 | 0 |
| LAYLISGTKGDSHRMMRTLQAVYHPRNQYILHLDLEAPPKERLELAMSVRSDSTFREVENVRVMSQSNLVTYKGPTMIACTLQAVAILLKESLDWDWFLN LSASDYPLVTQDDLLYVFSNLSRSVNFIEHMKLTGWKLNQRAKSIIVDPGLYLSKKTEIAWTTQHRSLPTAFKLFTGSAWVVLTRSFLEYSILGWDNFPR TMLMYYANFVSSPEGYFHTLICNTEEFKSTAIGHDLHYIAWDYPPKQHPNSLSMKDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 450 Download |
| MKKVYRKLIW MRDPLTRVKR HVSSHSGFRV FRDRNWMFPF LASLVLSVTL LMSVLYVQFD 60 SSYVEEEPLS FDSVSEELKD YFVESHFRKS LNSTGDSNSS EVPKLAYLIS GTKGDSHRMM 120 RTLQAVYHPR NQYILHLDLE APPKERLELA MSVRSDSTFR EVENVRVMSQ SNLVTYKGPT 180 MIACTLQAVA ILLKESLDWD WFLNLSASDY PLVTQDDLLY VFSNLSRSVN FIEHMKLTGW 240 KLNQRAKSII VDPGLYLSKK TEIAWTTQHR SLPTAFKLFT GSAWVVLTRS FLEYSILGWD 300 NFPRTMLMYY ANFVSSPEGY FHTLICNTEE FKSTAIGHDL HYIAWDYPPK QHPNSLSMKD 360 FDNMVKSNAS FARKFHKNDP VLDKIDRELL GRTHQFSSGA WCIGTSENGA DPCSVRGDNS 420 VLKPGPGAER LMELVQTLLS DEFRRKQCS* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 5.0e-77 | 105 | 365 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 2.0e-180 | 100 | 448 | 351 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001077453.1 | 0 | 91 | 449 | 1 | 358 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | NP_171851.1 | 0 | 1 | 449 | 1 | 447 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | NP_192243.1 | 0 | 1 | 449 | 1 | 448 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002319376.1 | 0 | 18 | 449 | 1 | 433 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517977.1 | 0 | 11 | 449 | 1 | 439 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.000000003 | 121 | 325 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.000000003 | 121 | 325 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.000000003 | 121 | 325 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.000000003 | 121 | 325 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.000000007 | 121 | 325 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
