y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10000991m |
Family | GT14 |
Protein Properties | Length: 437 Molecular Weight: 49786.2 Isoelectric Point: 9.6751 |
Chromosome | Chromosome/Scaffold: 6 Start: 4915164 End: 4917300 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 89 | 345 | 0 |
LAYLISGSSGDGQMLKRTLMALYHPNNQYVVHLDRESSPAERLDLSGFVANQTLFQRFQNVRMIVKANFVTYRGPTMVANTLHAAAILLREGGDWDWFIN LSASDYPLVTQDDLLHTFSYLPRDLNFIDHTSNIGWKESHRAKPIIIDPGLYMSKKADVFWVSQKRSMPTAFKLFTGSAWMMLSRPFVDYFIWGWDNLPR IMLMYYSNFLSSPEGYFHTVICNAREFTNTTVNSDLHFISWDNPPKQHPHHLTLDDF |
Full Sequence |
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Protein Sequence Length: 437 Download |
MKKLKSYYMQ VRHQQQSLDR RWILPLAIGS ICSLFLLLLT NLASSSSQTR LIPFSVYGFR 60 SSSVFVESKI NPLSVSVSVS VSPPPPPRLA YLISGSSGDG QMLKRTLMAL YHPNNQYVVH 120 LDRESSPAER LDLSGFVANQ TLFQRFQNVR MIVKANFVTY RGPTMVANTL HAAAILLREG 180 GDWDWFINLS ASDYPLVTQD DLLHTFSYLP RDLNFIDHTS NIGWKESHRA KPIIIDPGLY 240 MSKKADVFWV SQKRSMPTAF KLFTGSAWMM LSRPFVDYFI WGWDNLPRIM LMYYSNFLSS 300 PEGYFHTVIC NAREFTNTTV NSDLHFISWD NPPKQHPHHL TLDDFQRMVD SNAPFARKFR 360 RDEPVLDKID SELLSRSHGM VTPGGWCIGT RVNGSDPCAE IGDTSVIKPG LGAKRVEKLV 420 TYLLSTENFR PRQCRR* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 4.0e-87 | 89 | 349 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 18 | 435 | 424 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_197009.1 | 0 | 1 | 435 | 1 | 434 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002282083.1 | 0 | 1 | 435 | 1 | 428 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305329.1 | 0 | 1 | 435 | 1 | 428 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324028.1 | 0 | 1 | 435 | 1 | 428 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517446.1 | 0 | 1 | 435 | 1 | 430 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000000006 | 101 | 290 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000000006 | 101 | 290 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000000006 | 101 | 290 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000000006 | 101 | 290 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000000001 | 101 | 290 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |