Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10001068m |
Family | CE16 |
Protein Properties | Length: 415 Molecular Weight: 45711.3 Isoelectric Point: 9.0793 |
Chromosome | Chromosome/Scaffold: 6 Start: 16220932 End: 16222997 |
Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE16 | 67 | 393 | 1.9e-25 |
FNFGDSNSDTGGFWAAFPAQSGPWGMTYFKKPAGRASDGRLIIDFLAKSLGMPFLSPYLQSIGSDFRHGANFATLASTVLLPNTSLFVTGISPFSLAIQL NQMKQFKVKVDESHSSDQPESKKMLPSRNVFGKSLYTFYIGQNDFTSNLASIGVDGVKQYLPQVIGQIAGTIKEIYGIGGRTFLVLNLAPVGCYPAILTG YTHTSADLDKFGCLIPVNKAVQYYNALLNKTLSETRTELKDATVIYLDTHKILLDLFQHPKSYGMKHGIKACCGHGGRPYNFDQKIFCGNTKVIGNSSAT AKACRDPHNYVSWDGIHATEAANHHIS |
Full Sequence |
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Protein Sequence Length: 415 Download |
QNSYSTKYLI HTLTYKHTFC SQRKREIERD MASDLNRRIA SSFLVLIIAM LNGHNKVYSK 60 CDFEAIFNFG DSNSDTGGFW AAFPAQSGPW GMTYFKKPAG RASDGRLIID FLAKSLGMPF 120 LSPYLQSIGS DFRHGANFAT LASTVLLPNT SLFVTGISPF SLAIQLNQMK QFKVKVDESH 180 SSDQPESKKM LPSRNVFGKS LYTFYIGQND FTSNLASIGV DGVKQYLPQV IGQIAGTIKE 240 IYGIGGRTFL VLNLAPVGCY PAILTGYTHT SADLDKFGCL IPVNKAVQYY NALLNKTLSE 300 TRTELKDATV IYLDTHKILL DLFQHPKSYG MKHGIKACCG HGGRPYNFDQ KIFCGNTKVI 360 GNSSATAKAC RDPHNYVSWD GIHATEAANH HISMAILDGS ISYPPFTLNN LCPP* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00657 | Lipase_GDSL | 2.0e-18 | 182 | 396 | 221 | + GDSL-like Lipase/Acylhydrolase. | ||
PLN03156 | PLN03156 | 6.0e-27 | 65 | 397 | 345 | + GDSL esterase/lipase; Provisional | ||
cd01846 | fatty_acyltransferase_like | 2.0e-31 | 69 | 398 | 333 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
cd01837 | SGNH_plant_lipase_like | 1.0e-110 | 65 | 400 | 343 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
Gene Ontology | |
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GO Term | Description |
GO:0006629 | lipid metabolic process |
GO:0016788 | hydrolase activity, acting on ester bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB61024.1 | 0 | 31 | 414 | 1 | 367 | similar to the GDSL family of lipolytic enzymes [Arabidopsis thaliana] |
GenBank | ACU18463.1 | 0 | 41 | 412 | 7 | 381 | unknown [Glycine max] |
RefSeq | NP_192022.1 | 0 | 31 | 414 | 1 | 382 | acetylesterase, putative [Arabidopsis thaliana] |
RefSeq | XP_002320844.1 | 0 | 58 | 412 | 21 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511954.1 | 0 | 43 | 410 | 20 | 383 | Esterase precursor, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EG486626 | 309 | 31 | 339 | 0 |
EG486627 | 280 | 91 | 370 | 0 |
BM986011 | 268 | 31 | 298 | 0 |
FD985136 | 243 | 69 | 311 | 0 |
EX765453 | 248 | 29 | 276 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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