Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10001325m |
Family | AA2 |
Protein Properties | Length: 346 Molecular Weight: 37993.6 Isoelectric Point: 8.5557 |
Chromosome | Chromosome/Scaffold: 6 Start: 12256473 End: 12258863 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 36 | 309 | 0 |
VFDIATKTIVKALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNAKSARGFDVIDEMKAAVEKACPRTVSCADLLAIAAQESVVLAG GPSWMVPSGRRDSLRGFMDLANDNLPAPFFTLKQLKDSFKKVGLDLPSDLVALSGGHTFGKNQCQFIMDRLYNFSSTGKPDPSLDKSYLSTLRKQCPRNG NQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAKDTIPLVRAYADGQGKFFDAFVKAMIRMGNL |
Full Sequence |
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Protein Sequence Length: 346 Download |
MSSSLTKLGF VLILLQVSLS HAQLSPSFYD KTCPQVFDIA TKTIVKALRS DPRIAASILR 60 LHFHDCFVNG CDASILLDNT TSFRTEKDAF GNAKSARGFD VIDEMKAAVE KACPRTVSCA 120 DLLAIAAQES VVLAGGPSWM VPSGRRDSLR GFMDLANDNL PAPFFTLKQL KDSFKKVGLD 180 LPSDLVALSG GHTFGKNQCQ FIMDRLYNFS STGKPDPSLD KSYLSTLRKQ CPRNGNQSVL 240 VDFDLRTPTL FDNKYYVNLK ENKGLIQSDQ ELFSSPDAKD TIPLVRAYAD GQGKFFDAFV 300 KAMIRMGNLS PLTGKQGEIR SNCRVVNSKP RIMDVVDVVD FVSSM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 0.009 | 257 | 290 | 34 | + Peroxidase. | ||
cd00314 | plant_peroxidase_like | 8.0e-35 | 38 | 308 | 300 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 6.0e-64 | 42 | 193 | 152 | + Peroxidase. | ||
PLN03030 | PLN03030 | 1.0e-84 | 28 | 327 | 307 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 7.0e-172 | 23 | 326 | 304 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM97030.1 | 0 | 1 | 345 | 1 | 346 | peroxidase C2 precursor-like protein [Arabidopsis thaliana] |
EMBL | CAA66959.1 | 0 | 1 | 345 | 8 | 352 | peroxidase [Arabidopsis thaliana] |
RefSeq | NP_192617.1 | 0 | 1 | 345 | 1 | 346 | peroxidase, putative [Arabidopsis thaliana] |
RefSeq | NP_192618.1 | 0 | 1 | 345 | 1 | 346 | peroxidase, putative [Arabidopsis thaliana] |
Swiss-Prot | P17179 | 0 | 16 | 345 | 18 | 347 | PER2_ARMRU RecName: Full=Peroxidase C2; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1w4y_A | 0 | 23 | 345 | 1 | 323 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
PDB | 1w4w_A | 0 | 23 | 345 | 1 | 323 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
PDB | 7atj_A | 0 | 23 | 329 | 1 | 307 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
PDB | 6atj_A | 0 | 23 | 329 | 1 | 307 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
PDB | 1h5m_A | 0 | 23 | 329 | 1 | 307 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |