y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10002568m |
Family | GT75 |
Protein Properties | Length: 349 Molecular Weight: 38617.3 Isoelectric Point: 4.7492 |
Chromosome | Chromosome/Scaffold: 6 Start: 5436085 End: 5437131 |
Description | Alpha-1,4-glucan-protein synthase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT75 | 6 | 346 | 0 |
INKNEVDIVIGALNADLTQFLTSWRPFFSGFHLIVVKDPELKEELNIPEGFDVDVYSKTDMEKVVGASNSTMFSGYSCRYFGYLVSKKKYIVSIDDDCVP AKDPKGFLVDAVSQHVFNLENPATPLFFNTLYDPYCEGADFVRGYPFSLRSGVPCAASCGLWLNLADLDAPTQALKTEQRNTSYVDAVMTVPAKAMLPIS GINIAFNRELVGPAMVPALRIAGEGKVRWETLEDVWCGMCLKHISDHLGYGVKTGMPYVWRNERGDAVESLRKKWEGMKLMEKSVPFFDSLKLPETALKV EDCVIELAKAVKEQLGSDDPAFTQAADAMVKWVQLWNSVNS |
Full Sequence |
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Protein Sequence Length: 349 Download |
MSSAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV 60 YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID DDCVPAKDPK GFLVDAVSQH 120 VFNLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL 180 KTEQRNTSYV DAVMTVPAKA MLPISGINIA FNRELVGPAM VPALRIAGEG KVRWETLEDV 240 WCGMCLKHIS DHLGYGVKTG MPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE 300 TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSG* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03214 | RGP | 0 | 3 | 347 | 345 | + Reversibly glycosylated polypeptide. | ||
PLN03180 | PLN03180 | 0 | 1 | 347 | 348 | + reversibly glycosylated polypeptide; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0007047 | : GO:0044234 |
GO:0008466 | glycogenin glucosyltransferase activity |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030054 | cell junction |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD28560.1 | 0 | 1 | 347 | 1 | 347 | Alpha-1,4-glucan-protein synthase (UDP-forming) [Medicago truncatula] |
RefSeq | NP_197155.1 | 0 | 1 | 348 | 1 | 348 | reversibly glycosylated polypeptide, putative [Arabidopsis thaliana] |
RefSeq | XP_002325896.1 | 0 | 1 | 346 | 1 | 346 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332719.1 | 0 | 1 | 346 | 1 | 346 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512611.1 | 0 | 1 | 346 | 1 | 346 | Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FY451572 | 264 | 42 | 305 | 0 |
FY442484 | 258 | 92 | 349 | 0 |
EV185177 | 250 | 1 | 250 | 0 |
FY428111 | 245 | 5 | 249 | 0 |
DK492855 | 243 | 1 | 243 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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