Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10002603m |
Family | GH3 |
Protein Properties | Length: 629 Molecular Weight: 67985.5 Isoelectric Point: 9.0305 |
Chromosome | Chromosome/Scaffold: 6 Start: 7130048 End: 7132659 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 109 | 342 | 0 |
LSTRLGIPIIYGIDAVHGHNNAYNATIFPHNIGLGATRDPGLVKRIGEATALEVRATGIQYVFAPCIAVCRDPRWGRCYESYSEDHRLVQQMTEIIPGLQ GDLPTNQTGVPFVAGKTKVAACAKHFVGDGGTLRGMNANNTVTSANGLLGIHMPAYYDAVNKGVATVMVSYSSLNGLKMHANKKLITGFLKNKLKFRGIV ISDYLGVDQITTPLGANYSHSVYAAITAGLDMIM |
Full Sequence |
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Protein Sequence Length: 629 Download |
MGSLSYLLQR LGLLLLCCAV AANKLPLASA KYKDPKEPLG VRIKSLMSRM TLEEKIGQMI 60 QVERVNATAE VIRKYFIGSV FSGGGSVPTP NASPEAWVNM VNEIQKKALS TRLGIPIIYG 120 IDAVHGHNNA YNATIFPHNI GLGATRDPGL VKRIGEATAL EVRATGIQYV FAPCIAVCRD 180 PRWGRCYESY SEDHRLVQQM TEIIPGLQGD LPTNQTGVPF VAGKTKVAAC AKHFVGDGGT 240 LRGMNANNTV TSANGLLGIH MPAYYDAVNK GVATVMVSYS SLNGLKMHAN KKLITGFLKN 300 KLKFRGIVIS DYLGVDQITT PLGANYSHSV YAAITAGLDM IMGSSNLTEL IDELTSQVKR 360 KLIPMSRIDD AVERILRVKF TMGLFEDPMA DNSLAKHLGS KEHRELAREA VRKSLVLLKN 420 GENADKPLLP LPKKTNKILV AGTHANNLGY QCGGWTITWQ GLSGNNLTIG TTILAAVKNT 480 VDRTTNVVYK QNPDTNFVKS GEFDYAIVVV GEKLYAEGFG DSTNLTISEP GPSTMENVCG 540 SVKCVVVVVS GRPVVMQPYI SNMDALVAAW LPGTEGQGVA DVLFGDYGFT GKLARTWFRT 600 VDQLPMNVGD PHYDPLYPFG FGLVTNPI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 6.0e-13 | 562 | 623 | 84 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 9.0e-35 | 415 | 623 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-59 | 43 | 420 | 401 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 6.0e-86 | 50 | 478 | 439 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 6.0e-87 | 51 | 378 | 332 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 31 | 627 | 27 | 624 | beta-D-glucosidase [Gossypium hirsutum] |
EMBL | CAA07070.1 | 0 | 6 | 627 | 4 | 625 | beta-D-glucosidase [Tropaeolum majus] |
RefSeq | NP_197594.2 | 0 | 1 | 627 | 1 | 625 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | NP_197595.2 | 0 | 1 | 627 | 1 | 621 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002313632.1 | 0 | 1 | 627 | 1 | 624 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 32 | 626 | 5 | 600 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 1iex_A | 0 | 32 | 626 | 5 | 600 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 1iew_A | 0 | 32 | 626 | 5 | 600 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 1iev_A | 0 | 32 | 626 | 5 | 600 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 1ieq_A | 0 | 32 | 626 | 5 | 600 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |