| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10002637m |
| Family | GH116 |
| Protein Properties | Length: 921 Molecular Weight: 104279 Isoelectric Point: 6.2534 |
| Chromosome | Chromosome/Scaffold: 6 Start: 12982791 End: 12988334 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 492 | 853 | 0 |
| GQFIYLEGVEYRMYNTYDVHFYSSFALLSLFPKLALSVQRDFAATVLFQDHTKKQIMSYGEWVPRKLLGSVPHDIGLNDPWHELNEYNFFNTDRWKDLNA KFVLQVYRDVVATGDQSFAKAVWPSVYTAVAYLDQFDKDEDGMIENEGFPDQTYDAWSVTGVSAYCGGLWVAALQAASALASIVGENTVAIYFNAKYEKA KRVYEKLWNGSYFNYDDSGSGSSSSILADQLAGQWYARACGLKPITKDEWIKKALETIYEFNVMKVRGGTRGAVNGMSPDGKVDTNSLVSKEVWAGTTYS VAACMIQEGQRDKGFKTASGIYEAVWSDRGISCSFQTPEAWNMNDEYRSLCYMRPLAIWAIQ | |||
| Full Sequence |
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| Protein Sequence Length: 921 Download |
| MENSHMESEL QTQMVGNERL PQVTWQRKLN SKVKNPSEFK MSIKDYLHLF PIGYRLWRYT 60 KEQAVKGRAS MYDMFKKRHI RGDHGVPLGG IGGGSIGRSY KGEFQQFKFF PNVCEEAPIL 120 TNQFSVFVSR PGDVSYSTVL CPTKPESLNG KTEDLGIESW DWNMKGDKSM YHALYPRSWT 180 VYNEPDPELR IVSRQVSPFI PQNYKESSLP VSVFDFTMSN LGKEETTVTL LFTWENSVGG 240 ASGLTGEHFN STVMESNGVH AIALHHKTAN GHPPVTYSIA ARETEDVHVS ECPCFLVSGH 300 SPKEITAKDM WDEIKKNKSF DGLNSEPGSR SRPGTSIGAA ISAKVKVPPG CDRTVTFSLS 360 WDCPEVRFNE KTYHRRYTKF YGNLGDAAVK MARDALLSYV DWEFQIEAWQ SPILSDTTLP 420 DWYRVTLFNE LYYFNSGGTI WTDGLPAKES IERSKILNTE QNKIVLDLFE KINAVCEQIH 480 SPQTLKEEEN IGQFIYLEGV EYRMYNTYDV HFYSSFALLS LFPKLALSVQ RDFAATVLFQ 540 DHTKKQIMSY GEWVPRKLLG SVPHDIGLND PWHELNEYNF FNTDRWKDLN AKFVLQVYRD 600 VVATGDQSFA KAVWPSVYTA VAYLDQFDKD EDGMIENEGF PDQTYDAWSV TGVSAYCGGL 660 WVAALQAASA LASIVGENTV AIYFNAKYEK AKRVYEKLWN GSYFNYDDSG SGSSSSILAD 720 QLAGQWYARA CGLKPITKDE WIKKALETIY EFNVMKVRGG TRGAVNGMSP DGKVDTNSLV 780 SKEVWAGTTY SVAACMIQEG QRDKGFKTAS GIYEAVWSDR GISCSFQTPE AWNMNDEYRS 840 LCYMRPLAIW AIQWGLTRTG SVEADKLKLV EGKEEESDTL SRQHKGFKDV AHFVKILPTS 900 NEHRSRLQDM YEAVLKTLRL * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12215 | GBA2_N | 2.0e-53 | 120 | 402 | 292 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 6.0e-98 | 152 | 852 | 731 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 6.0e-157 | 492 | 854 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM19831.1 | 0 | 2 | 920 | 3 | 922 | AT4g10060/T5L19_190 [Arabidopsis thaliana] |
| GenBank | AAO42222.1 | 0 | 9 | 920 | 6 | 947 | unknown protein [Arabidopsis thaliana] |
| EMBL | CAB39630.1 | 0 | 210 | 920 | 71 | 750 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_174631.2 | 0 | 9 | 920 | 6 | 947 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | NP_192744.6 | 0 | 2 | 920 | 3 | 922 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY292040 | 367 | 505 | 868 | 0 |
| JG703027 | 328 | 510 | 837 | 0 |
| FC917648 | 306 | 505 | 810 | 0 |
| EG467053 | 213 | 194 | 406 | 0 |
| EG467051 | 213 | 194 | 406 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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