| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10002796m |
| Family | AA1 |
| Protein Properties | Length: 514 Molecular Weight: 57543.1 Isoelectric Point: 7.3487 |
| Chromosome | Chromosome/Scaffold: 6 Start: 310751 End: 312784 |
| Description | laccase 8 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA1 | 135 | 488 | 0 |
| FNLNVVQRKTYLLRIINAALNTHLFFKIANHNVTVVAVDAVYTTPYFTDVMILTPGQTVDALLTADQPIGMYYMAIIPYISANGQPTPEIKPTRGLIVYE GATSSTPTKPLMPASDDISTAHRFSSNITSLVSGPHWTPVPRHVDEKMFITMGLGLDPCPLNTKCIGELGQRYAGSLNNHTFVLPASISLQEAYFYNITG VYTNDFPDQPPIKFDYVNFQQLTSYDYKMMFPERKTSVKVIRFNSTVEIVLQNTGIITTESHPMHLHGFNFYVLGYGFGNYDHVRDARKLNLFNPQMHNT VGVPPAGWVVIRFIADNPGVWMFHCHMDAHLPYGIIMAFIVQNGPTPETSLPSP | |||
| Full Sequence |
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| Protein Sequence Length: 514 Download |
| VKNVVVKPLC KEQLIPSVNG SLPGPTINVR EGDTLVVHVI NNSTYNITIH WHGVFQLKSS 60 WMDGANMITQ CPIQPNNDFT YRFDVTGQEG TLLWHAHVVN LRATLHGALI IRPRSNLPYP 120 FPKPYKEVPL IFGMFNLNVV QRKTYLLRII NAALNTHLFF KIANHNVTVV AVDAVYTTPY 180 FTDVMILTPG QTVDALLTAD QPIGMYYMAI IPYISANGQP TPEIKPTRGL IVYEGATSST 240 PTKPLMPASD DISTAHRFSS NITSLVSGPH WTPVPRHVDE KMFITMGLGL DPCPLNTKCI 300 GELGQRYAGS LNNHTFVLPA SISLQEAYFY NITGVYTNDF PDQPPIKFDY VNFQQLTSYD 360 YKMMFPERKT SVKVIRFNST VEIVLQNTGI ITTESHPMHL HGFNFYVLGY GFGNYDHVRD 420 ARKLNLFNPQ MHNTVGVPPA GWVVIRFIAD NPGVWMFHCH MDAHLPYGII MAFIVQNGPT 480 PETSLPSPPS NLPQCTRDPT IYDSRTTDVD LSY* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03388 | ascorbase | 1.0e-28 | 1 | 121 | 123 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 5.0e-41 | 135 | 473 | 359 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 4.0e-44 | 135 | 473 | 352 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-46 | 1 | 115 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 0 | 1 | 478 | 522 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_195724.1 | 0 | 1 | 513 | 34 | 584 | LAC8 (laccase 8); laccase [Arabidopsis thaliana] |
| RefSeq | NP_195725.1 | 0 | 1 | 513 | 34 | 586 | laccase family protein / diphenol oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002308196.1 | 0 | 1 | 495 | 31 | 562 | laccase 110a [Populus trichocarpa] |
| RefSeq | XP_002322939.1 | 0 | 1 | 495 | 31 | 569 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527888.1 | 0 | 1 | 495 | 4 | 540 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 1 | 473 | 10 | 521 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 1asq_A | 0 | 1 | 473 | 10 | 521 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 1asp_B | 0 | 1 | 473 | 10 | 521 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 1asp_A | 0 | 1 | 473 | 10 | 521 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 1aso_B | 0 | 1 | 473 | 10 | 521 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO797675 | 486 | 39 | 478 | 0 |
| DY941206 | 306 | 146 | 451 | 0 |
| DY271840 | 296 | 135 | 429 | 0 |
| AU229348 | 168 | 261 | 428 | 0 |
| HO760754 | 290 | 183 | 464 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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