| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10002868m |
| Family | GH5 |
| Protein Properties | Length: 528 Molecular Weight: 59451.4 Isoelectric Point: 8.3775 |
| Chromosome | Chromosome/Scaffold: 6 Start: 5819528 End: 5821993 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 36 | 350 | 4.69996e-41 |
| IVNNKGQRVKLACTNWPSHLKPVVAEGLSSQPIDYISKKIKDMGFNCVRLTWPLELMINDTLAFNVTVKQSFERYGLDHELQGIYAHNPSIVNIPLINVF QAVVYSLGRHDLMVILDNHKTVPGWCCSNDDPDAFFNDPKFNPDLWMLGLKKMATIFLNVNNVVGMSLRNELRGYNHTAKDWYKYMQKGAEAVHTSNPNV LVILSGLSFDADLSFLKDRPVSLSFKKKLVLELHWYAFTDGTGQWKSHNVNDFCSQMFAKERRTGGFVLEQGFPLFLSEFGTDQRGGDFEGNRYMSCMLA WAAEKDMDWAVWALT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 528 Download |
| MAKTISPITL FLFLLLSSLS LTLATDYPLS TKSRWIVNNK GQRVKLACTN WPSHLKPVVA 60 EGLSSQPIDY ISKKIKDMGF NCVRLTWPLE LMINDTLAFN VTVKQSFERY GLDHELQGIY 120 AHNPSIVNIP LINVFQAVVY SLGRHDLMVI LDNHKTVPGW CCSNDDPDAF FNDPKFNPDL 180 WMLGLKKMAT IFLNVNNVVG MSLRNELRGY NHTAKDWYKY MQKGAEAVHT SNPNVLVILS 240 GLSFDADLSF LKDRPVSLSF KKKLVLELHW YAFTDGTGQW KSHNVNDFCS QMFAKERRTG 300 GFVLEQGFPL FLSEFGTDQR GGDFEGNRYM SCMLAWAAEK DMDWAVWALT GVYYFREGKR 360 GVVEAYGMLD ANWHNVHNST YLRRLSVIQP PHKGPGIRRN HHKKIFHPLT GLCLVRKSPC 420 HDSELTLGPC TKDEPWSYSH GGTLEIKGGH KSCLEGETAV GKSVKLGKRC TKVKQISATK 480 MHLSFETDEG SLVCLDVDSD NNVIANSCKC LTGDVSCEPA SQWFKIF* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 1.0e-16 | 67 | 351 | 292 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD31066.1 | 0 | 27 | 527 | 3 | 503 | AC007357_15 F3F19.15 [Arabidopsis thaliana] |
| RefSeq | NP_172772.2 | 0 | 27 | 527 | 33 | 533 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | NP_197252.1 | 0 | 26 | 527 | 25 | 526 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002312657.1 | 0 | 24 | 526 | 7 | 508 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002315653.1 | 0 | 28 | 526 | 4 | 501 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.00000000000001 | 31 | 317 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.00000000000001 | 31 | 317 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.0000000000002 | 31 | 317 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.0000000000002 | 31 | 317 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 2zun_C | 0.0000002 | 44 | 385 | 61 | 408 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
