| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10002899m |
| Family | GH27 |
| Protein Properties | Length: 371 Molecular Weight: 40875.3 Isoelectric Point: 7.1374 |
| Chromosome | Chromosome/Scaffold: 6 Start: 2670713 End: 2673072 |
| Description | alpha-galactosidase 2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 207 | 288 | 5.7e-26 |
| QWASYARPGSWNDPDMLEVGNGGMTKEEYRSHFSIWALAKAPLLIGCDLRSMDKGTFELLSNKEVISVNQDKLGIQGKKVKK | |||
| GH27 | 3 | 107 | 5.5e-32 |
| RMLMDNGLALSPQMGWNSWNHFQCNINETLIKQTADAMVSSDLAAKGYKYINIDDCWGELNRDSKGNLVAKASTFPSGIKALADYVHSKGLKLGIYSDAG TLTCS | |||
| GH27 | 108 | 205 | 5.2e-34 |
| QTMPGSLGHEEQDAKTFASWGIDYLKYDNCGNTGTSPRERYPKMSKALLNSGRSIFFSLCEWGVEDPATWAGAIGNSWRTTGDIEDKWSSMTTIADLN | |||
| Full Sequence |
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| Protein Sequence Length: 371 Download |
| MSRMLMDNGL ALSPQMGWNS WNHFQCNINE TLIKQTADAM VSSDLAAKGY KYINIDDCWG 60 ELNRDSKGNL VAKASTFPSG IKALADYVHS KGLKLGIYSD AGTLTCSQTM PGSLGHEEQD 120 AKTFASWGID YLKYDNCGNT GTSPRERYPK MSKALLNSGR SIFFSLCEWG VEDPATWAGA 180 IGNSWRTTGD IEDKWSSMTT IADLNDQWAS YARPGSWNDP DMLEVGNGGM TKEEYRSHFS 240 IWALAKAPLL IGCDLRSMDK GTFELLSNKE VISVNQDKLG IQGKKVKKEG DLEVWAGPLS 300 KKRVAVILWN RGSVPANITA RWADLGLDSS VTVNARDLWE HLTHPSIKTQ LSALVEPHAC 360 KMYTLTRSKA * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03231 | PLN03231 | 2.0e-25 | 14 | 280 | 353 | + putative alpha-galactosidase; Provisional | ||
| pfam02065 | Melibiase | 3.0e-26 | 14 | 281 | 338 | + Melibiase. | ||
| PLN02808 | PLN02808 | 0 | 1 | 367 | 367 | + alpha-galactosidase | ||
| PLN02229 | PLN02229 | 0 | 3 | 366 | 368 | + alpha-galactosidase | ||
| PLN02692 | PLN02692 | 0 | 1 | 365 | 366 | + alpha-galactosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI47559.1 | 0 | 3 | 366 | 55 | 418 | alpha galactosidase [Coffea arabica] |
| RefSeq | NP_001031855.1 | 0 | 1 | 370 | 1 | 370 | AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_568193.1 | 0 | 2 | 370 | 28 | 396 | AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Swiss-Prot | Q42656 | 0 | 3 | 366 | 13 | 376 | AGAL_COFAR RecName: Full=Alpha-galactosidase; AltName: Full=Alpha-D-galactoside galactohydrolase; AltName: Full=Melibiase; Flags: Precursor |
| RefSeq | XP_002331416.1 | 0 | 3 | 366 | 2 | 365 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 6 | 366 | 1 | 360 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 7 | 368 | 2 | 393 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktc_A | 0 | 6 | 365 | 1 | 384 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktb_A | 0 | 6 | 365 | 1 | 384 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 4do6_B | 0 | 6 | 369 | 1 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GT034265 | 337 | 16 | 351 | 0 |
| DR943152 | 285 | 49 | 333 | 0 |
| FY432161 | 248 | 2 | 249 | 0 |
| EL414693 | 274 | 14 | 287 | 0 |
| DV703619 | 266 | 3 | 268 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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