| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10003074m |
| Family | GH27 |
| Protein Properties | Length: 394 Molecular Weight: 43778.1 Isoelectric Point: 6.5092 |
| Chromosome | Chromosome/Scaffold: 6 Start: 2674586 End: 2677295 |
| Description | alpha-galactosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 228 | 322 | 8.5e-28 |
| NEVYAEHARPGGWNDPDMLEVGNGGMTKEEYIVHFSIWAISKAPLLLGCDIRNMTKETMEIVANKEVIAINQDPHGVQAKKVRMEGDIEVWAGPL | |||
| GH27 | 132 | 229 | 1.2e-30 |
| TMPGSLGHEEHDAKTFAEWGIDYLKYDNCNNDGSKPTVRYPVMTRALMKSGRPIFHSLCEWGDMHPALWGSPVGNSWRTTNDIKDNWLSMISIADMNE | |||
| GH27 | 19 | 130 | 6.2e-33 |
| DDSEILRRHLLANGLGVTPPMGWNSWNHFSCNIDERMIKETADALVTTGLSKLGYNYVNIDDCWAEIARDNKGSLVPKKSTFPSGIKALADYVHSKGLKL GIYSDAGYFTCS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 394 Download |
| MVLVLSMVMT MAESSRSVDD SEILRRHLLA NGLGVTPPMG WNSWNHFSCN IDERMIKETA 60 DALVTTGLSK LGYNYVNIDD CWAEIARDNK GSLVPKKSTF PSGIKALADY VHSKGLKLGI 120 YSDAGYFTCS KTMPGSLGHE EHDAKTFAEW GIDYLKYDNC NNDGSKPTVR YPVMTRALMK 180 SGRPIFHSLC EWGDMHPALW GSPVGNSWRT TNDIKDNWLS MISIADMNEV YAEHARPGGW 240 NDPDMLEVGN GGMTKEEYIV HFSIWAISKA PLLLGCDIRN MTKETMEIVA NKEVIAINQD 300 PHGVQAKKVR MEGDIEVWAG PLSGYRVALL LLNRGPSRNS ITALWDDIEI PANSIVQARD 360 LWEHKTLKQK FVGNLTATVD SHACKLYVLK PVA* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02065 | Melibiase | 1.0e-23 | 24 | 275 | 327 | + Melibiase. | ||
| PLN03231 | PLN03231 | 2.0e-25 | 37 | 303 | 353 | + putative alpha-galactosidase; Provisional | ||
| PLN02692 | PLN02692 | 0 | 1 | 393 | 399 | + alpha-galactosidase | ||
| PLN02808 | PLN02808 | 0 | 16 | 391 | 376 | + alpha-galactosidase | ||
| PLN02229 | PLN02229 | 0 | 10 | 392 | 386 | + alpha-galactosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM13199.1 | 0 | 1 | 393 | 14 | 410 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
| GenBank | ABC55266.1 | 0 | 1 | 393 | 15 | 413 | acid alpha galactosidase 1 [Cucumis sativus] |
| RefSeq | NP_196455.1 | 0 | 1 | 393 | 14 | 410 | AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002316426.1 | 0 | 25 | 393 | 1 | 369 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513158.1 | 0 | 21 | 393 | 40 | 412 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 29 | 391 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 31 | 386 | 3 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktc_A | 0 | 29 | 393 | 1 | 388 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktb_A | 0 | 29 | 393 | 1 | 388 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 3lrl_A | 0 | 31 | 363 | 24 | 395 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX125400 | 298 | 97 | 394 | 0 |
| EX125352 | 298 | 97 | 394 | 0 |
| FY448974 | 272 | 123 | 394 | 0 |
| FE528789 | 294 | 80 | 373 | 0 |
| EX271520 | 303 | 2 | 302 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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