CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10003419m
FamilyAA2
Protein PropertiesLength: 341 Molecular Weight: 37365.6 Isoelectric Point: 7.9799
ChromosomeChromosome/Scaffold: 6 Start: 8160316 End: 8161987
DescriptionPeroxidase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
AA2623170
  KSDNTIAPKLLRLLYSDCMVNGCDASVLLQGPNSERTAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGRLY
  ADAVDLPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSHIVNRLYNYKNTGKPDPSMNTTLVSQLRYLCPPRTQKGQTDPLVYLNPDSGSSNR
  FSSSYYSRVLSHNAVLGIDQELLNNEDTKEITQEFAVGFEDFRKSFALAMSRMGSI
Full Sequence
Protein Sequence     Length: 341     Download
MQFVKFFPLL AIVVISLAGT ATVEAATGMN PPVKLIWHYY KITNTCDDAE TYIRYQVEKL    60
YKSDNTIAPK LLRLLYSDCM VNGCDASVLL QGPNSERTAP QNRGLGGFVI IDKIKQVLES    120
RCPGVVSCAD ILNLATRDAV HMAGAPSYPV FTGRRDGGRL YADAVDLPSP SISVDESLAY    180
FKSKGLDVLD MTTLLGAHSM GKTHCSHIVN RLYNYKNTGK PDPSMNTTLV SQLRYLCPPR    240
TQKGQTDPLV YLNPDSGSSN RFSSSYYSRV LSHNAVLGID QELLNNEDTK EITQEFAVGF    300
EDFRKSFALA MSRMGSINVL TGTAGEIRRD CKVTNANYGA * 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00692ligninase8.0e-782199121+
cd00314plant_peroxidase_like7.0e-2053316281+
pfam00141peroxidase2.0e-5853199149+
PLN03030PLN030302.0e-7345335297+
cd00693secretory_peroxidase1.0e-13134334305+
Gene Ontology
GO TermDescription
GO:0004601peroxidase activity
GO:0006979response to oxidative stress
GO:0020037heme binding
GO:0055114oxidation-reduction process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PIR02233512325UP10_LACSN Unknown protein 10 from 2D-PAGE
GenBankAAL84934.1013351335At2g43480/T1O24.22 [Arabidopsis thaliana]
RefSeqNP_181876.2013351335peroxidase, putative [Arabidopsis thaliana]
RefSeqNP_197795.1013401340peroxidase family protein [Arabidopsis thaliana]
RefSeqXP_002310424.1063359336predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1qo4_A04533611305A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase
PDB1pa2_A04533611305A Chain A, Arabidopsis Thaliana Peroxidase A2
PDB1gw2_A0443379307A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid
PDB3atj_B04433710308A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid
PDB3atj_A04433710308A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid
Transmembrane Domains
StartEnd
729
Signal Peptide
Cleavage Site
25
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EX28075429542980
EX26010727742800
FN703782232232540
JZ012912268703360
GE347064256342880
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_028_00270.1
Arabidopsis lyrata488648489264483456913963354185
477612489097
Arabidopsis thalianaAT5G22410.1AT5G17820.1AT2G43480.1AT5G24070.1AT3G03670.1
AT4G26010.1AT1G34510.1
Brachypodium distachyonBradi3g33780.1Bradi3g10460.1Bradi3g10470.1
Brassica rapaBra006423Bra023639Bra036445Bra037713Bra009728
Bra026470Bra019132Bra013943Bra001084Bra019131
Bra020191
Carica papayaevm.model.supercontig_161.43evm.model.supercontig_1040.1evm.model.supercontig_13.208evm.model.supercontig_195.9
Capsella rubellaCarubv10003382mCarubv10003258mCarubv10024496mCarubv10006454mCarubv10006236m
Carubv10016138m
Citrus clementinaCiclev10024589mCiclev10024189mCiclev10023906mCiclev10030190m
Citrus sinensisorange1.1g043363morange1.1g045265morange1.1g040171m
Cucumis sativusCucsa.362070.1Cucsa.319800.1
Eucalyptus grandisEucgr.A02147.1Eucgr.J00503.1Eucgr.B03840.1Eucgr.B03838.1Eucgr.A00301.1
Eucgr.A00298.1Eucgr.A00295.1Eucgr.A00045.1Eucgr.A00299.2Eucgr.A00299.1
Eucgr.A00042.1Eucgr.A02146.1Eucgr.D00818.1Eucgr.A00296.1
Fragaria vescamrna26378.1-v1.0-hybridmrna07700.1-v1.0-hybridmrna21725.1-v1.0-hybrid
Glycine maxGlyma03g01020.1Glyma03g01010.1Glyma13g42140.1Glyma15g03250.1Glyma19g16960.1
Gossypium raimondiiGorai.004G252800.1Gorai.009G084400.1Gorai.007G253300.1Gorai.005G126200.1
Linum usitatissimumLus10004859Lus10005679Lus10032511Lus10020312Lus10022962
Lus10004804Lus10025586Lus10013631Lus10001324Lus10005681
Lus10043010Lus10018375Lus10020311
Malus domesticaMDP0000269302MDP0000264903MDP0000243237MDP0000156208
Manihot esculentacassava4.1_024710mcassava4.1_028102mcassava4.1_031145mcassava4.1_022946m
Medicago truncatulaMedtr7g086820.1Medtr7g086870.1
Mimulus guttatusmgv1a010343mmgv1a024318mmgv1a022139m
Oryza sativaLOC_Os03g05770.1LOC_Os04g01550.1LOC_Os10g41720.1LOC_Os09g15510.1LOC_Os09g15500.1
Panicum virgatumPavirv00070122mPavirv00055443mPavirv00050601mPavirv00048315mPavirv00056057m
Pavirv00026792mPavirv00052815mPavirv00005617mPavirv00066198mPavirv00005755m
Pavirv00010656mPavirv00020133m
Physcomitrella patensPp1s112_99V6.1Pp1s35_32V6.1Pp1s12_174V6.1
Phaseolus vulgarisPhvul.005G154900.1Phvul.004G053800.1Phvul.001G106500.1Phvul.001G106600.1
Picea abiesMA_257706g0010MA_10426168g0010.52.319MA_10426168g0010.52.319MA_180710g0010MA_10293471g0010
MA_10428075g0010MA_63239g0010MA_10372670g0010MA_10426168g0010.347.524MA_10426168g0010.347.524
Populus trichocarpaPotri.001G218500.1Potri.001G218600.1Potri.013G066800.1Potri.015G110200.1Potri.007G132800.1
Prunus persicappa023274mppa026551mppa009513m
Ricinus communis30072.m00092829272.m00004330147.m014371
Setaria italicaSi011748mSi036621mSi036586mSi036567mSi038861m
Si039188m
Selaginella moellendorffii416327
Sorghum bicolorSb06g000490.1Sb01g046800.1Sb01g028640.1Sb01g016620.1Sb01g028610.1
Thellungiella halophilaThhalv10015253mThhalv10014171mThhalv10004528mThhalv10001541mThhalv10025781m
Thhalv10021155mThhalv10026803m
Vitis viniferaGSVIVT01004097001GSVIVT01036100001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)