Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10003572m |
Family | CE8 |
Protein Properties | Length: 570 Molecular Weight: 62630.9 Isoelectric Point: 9.262 |
Chromosome | Chromosome/Scaffold: 6 Start: 1450844 End: 1452677 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 262 | 554 | 0 |
NIVVAKDGSGKYRTIGEALAQVEEKNEKPTIIYVKKGVYFENVRVEKKKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETATFAVFGKGFMARDMGFVNTA GPAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCSIFGTVDFIFGNAAVVFQNCQILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIK PLDNLTDIQTFLGRPWKEFSTTVIMKSFMDGFINPKGWLPWVGDTAPDTIFYAEHLNFGPGASTKNRVKWRGLKTSLTKKEANKFTVKPFIDG |
Full Sequence |
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Protein Sequence Length: 570 Download |
MSSYGKLDEH EQAILEASRR TRKRIAIIAI SSIVLVCIIV GAVVGTTAHA NGKKPSTEGN 60 GEPISASVKA LCDVTLHKDK CLETVGSAPN ASRLNPEELF NYAVKITVTE LSIVLSEFSN 120 GEHMDNATSA AMGTCVELIG LAADQLNETM TSIKDKTKNS DDLRTWLSSV GTYQETCMEA 180 LVEANRPSLT TFGETHLKNS TEMTSNALAI ITWLGKIADT VNLGRRRLMA SGEAKVVAND 240 LPMMMMKGRR LLESGDLRKK ANIVVAKDGS GKYRTIGEAL AQVEEKNEKP TIIYVKKGVY 300 FENVRVEKKK WNVVMVGDGQ SKTIVSAGLN FIDGTPTFET ATFAVFGKGF MARDMGFVNT 360 AGPAKHQAVA LMVSADLSVF YKCTMDAFQD TMYAHAQRQF YRDCSIFGTV DFIFGNAAVV 420 FQNCQILPRR PMKGQQNTIT AQGRKDPNQN TGISIHNCTI KPLDNLTDIQ TFLGRPWKEF 480 STTVIMKSFM DGFINPKGWL PWVGDTAPDT IFYAEHLNFG PGASTKNRVK WRGLKTSLTK 540 KEANKFTVKP FIDGNNWLPT TRVPFKSDF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 4.0e-156 | 42 | 565 | 534 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 2.0e-163 | 51 | 566 | 536 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 0 | 1 | 569 | 575 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 1 | 567 | 586 | + pectinesterase | ||
pfam01095 | Pectinesterase | 0 | 262 | 555 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO42295.1 | 0 | 1 | 569 | 1 | 564 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_187682.1 | 0 | 2 | 567 | 3 | 559 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_196115.1 | 0 | 1 | 569 | 1 | 564 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002316458.1 | 0 | 1 | 566 | 4 | 566 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515781.1 | 0 | 3 | 566 | 6 | 570 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 262 | 565 | 8 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 261 | 565 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-19 | 262 | 560 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-19 | 262 | 560 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-19 | 262 | 560 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |