| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10003619m |
| Family | CE8 |
| Protein Properties | Length: 225 Molecular Weight: 25241.7 Isoelectric Point: 9.1716 |
| Chromosome | Chromosome/Scaffold: 6 Start: 13661851 End: 13662525 |
| Description | methylesterase PCR A |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 2 | 208 | 0 |
| ALDIWFQNTAGPTKKQAVALRVNADQSVFYRCRIDGYQDTLFAQLNRQFYRDCYITGTIDFIFGDAAAIFQNCEIVARKPLNGQSNVLTAQGRIDPTRNS GFSLQRCNITASSDLAPVKGTVKSFLGRPWKKFSRVVIMQSFIDDFIDPGGWIPMNNDVGRLSTLFFGEYENKGPGADTRRRVKWQGHKLMTDSKEASKF TVTSLIN | |||
| Full Sequence |
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| Protein Sequence Length: 225 Download |
| MALDIWFQNT AGPTKKQAVA LRVNADQSVF YRCRIDGYQD TLFAQLNRQF YRDCYITGTI 60 DFIFGDAAAI FQNCEIVARK PLNGQSNVLT AQGRIDPTRN SGFSLQRCNI TASSDLAPVK 120 GTVKSFLGRP WKKFSRVVIM QSFIDDFIDP GGWIPMNNDV GRLSTLFFGE YENKGPGADT 180 RRRVKWQGHK LMTDSKEASK FTVTSLINGE LWLNSTIVPY EEGL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 1.0e-99 | 1 | 224 | 224 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 3.0e-100 | 1 | 224 | 224 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02488 | PLN02488 | 9.0e-113 | 1 | 224 | 224 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 6.0e-129 | 1 | 224 | 224 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 4.0e-131 | 1 | 210 | 210 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF16637.1 | 0 | 1 | 224 | 1 | 223 | AC011661_15 T23J18.24 [Arabidopsis thaliana] |
| RefSeq | NP_172624.1 | 0 | 1 | 224 | 335 | 557 | PMEPCRA (METHYLESTERASE PCR A); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
| Swiss-Prot | Q1JPL7 | 0 | 1 | 224 | 335 | 557 | PME18_ARATH RecName: Full=Pectinesterase/pectinesterase inhibitor 18; AltName: Full=AtPMEpcrA; Contains: RecName: Full=Pectinesterase inhibitor 18; AltName: Full=Pectin methylesterase inhibitor 18; Contains: RecName: Full=Bifunctional pectinesterase 18/rRNA N-glycosylase; Short=PE 18; AltName: Full=Ribosome-inactivating protein; AltName: Full=Pectin methylesterase 18; AltName: Full=Pectin methylesterase 4; Short=AtPME4; Flags: Precursor |
| RefSeq | XP_002266980.1 | 0 | 1 | 224 | 306 | 528 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002518523.1 | 0 | 1 | 224 | 325 | 547 | Pectinesterase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 4 | 224 | 96 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 1 | 224 | 97 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 2e-17 | 17 | 207 | 129 | 334 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 2e-17 | 17 | 207 | 129 | 334 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 2e-17 | 17 | 207 | 129 | 334 | A Chain A, Pectin Methylesterase From Carrot |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CV706159 | 225 | 1 | 225 | 0 |
| CN182877 | 225 | 1 | 225 | 0 |
| EG487520 | 222 | 1 | 222 | 0 |
| CX663775 | 225 | 1 | 225 | 0 |
| CV884338 | 225 | 1 | 225 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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