Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10003696m |
Family | CE8 |
Protein Properties | Length: 611 Molecular Weight: 66692.4 Isoelectric Point: 8.2567 |
Chromosome | Chromosome/Scaffold: 6 Start: 1453094 End: 1456216 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 294 | 589 | 0 |
VTVGPYETDNYPTITEAVAAAPNHTFPEQGYFVIYARAGLYEEYVVISNKKRNIMLIGDGINKTIITGNHSFIDGWTTYNSSTFTVVGDRFVAVDVTFRN TAGPAKHQAVAVRNNADGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIFARKPMANQKNAVTAHGRTDPNQKTGISIINCT IGAAPDLAADPNSTMTYLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGANTSKRVQWSGYSLLNLAEAMNFTVYNFT |
Full Sequence |
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Protein Sequence Length: 611 Download |
MQTRHFSSSL LFLALLCLSW TLLVSPTQPP SQSPSQSPSQ SPSQSPSQPP SQPPTQPPIR 60 PPTPPPSQPP NIACKSTPYP KLCRTILSAF KSSPSDPYNY GKFTMKQCIK QARRLSKVIN 120 RFSERVKDDP GAATAEEVGA VADCGELAAL SVDYLETVAE ELKAAEVMTA SLVDRVTSLL 180 GGVVTNQETC LDGLVDAKSG FATAIGTPLG NLTRLYSVSL GLVSHALNRN LKRYKGDKGK 240 IFGGGNKPVR EPLETLIKVL RKTCDKSKDC RKANRNLGEL GETSGGSILV REAVTVGPYE 300 TDNYPTITEA VAAAPNHTFP EQGYFVIYAR AGLYEEYVVI SNKKRNIMLI GDGINKTIIT 360 GNHSFIDGWT TYNSSTFTVV GDRFVAVDVT FRNTAGPAKH QAVAVRNNAD GSTFYRCSFE 420 GYQDTLYVHS LRQFYRECDI YGTIDFIFGN AAAIFQNCNI FARKPMANQK NAVTAHGRTD 480 PNQKTGISII NCTIGAAPDL AADPNSTMTY LGRPWKPYSR TVYIQSYISD VVQPVGWLEW 540 NGTTGLDTIS YGEYDNFGPG ANTSKRVQWS GYSLLNLAEA MNFTVYNFTL GDTWLPQTDI 600 PFYGGLLHTE * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 2.0e-138 | 143 | 606 | 471 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 5.0e-146 | 143 | 606 | 468 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 71 | 607 | 537 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
PLN02713 | PLN02713 | 0 | 73 | 607 | 540 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 294 | 592 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF19577.1 | 0 | 1 | 610 | 1 | 617 | AC011708_20 putative pectinesterase [Arabidopsis thaliana] |
DDBJ | BAH20370.1 | 0 | 161 | 610 | 1 | 450 | AT3G10720 [Arabidopsis thaliana] |
RefSeq | NP_187683.2 | 0 | 1 | 610 | 3 | 619 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_196116.1 | 0 | 1 | 610 | 1 | 624 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | XP_002515774.1 | 0 | 72 | 607 | 34 | 568 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 292 | 606 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 301 | 606 | 12 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-24 | 304 | 596 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-24 | 304 | 596 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-24 | 304 | 596 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |