| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10003708m |
| Family | CE8 |
| Protein Properties | Length: 510 Molecular Weight: 56276.6 Isoelectric Point: 7.9678 |
| Chromosome | Chromosome/Scaffold: 6 Start: 7097476 End: 7099509 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 251 | 494 | 0 |
| GHGKDQTVIVGGDSYAGGTSVPDTATMTVTGDGFIARDIGIKNNAGPRGQQAIALSITSDQSVLYRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGN AAAVFQSCNIFLRRPYGVKAYNVILANGRTDQRQNSGFALHSCRIRTDTDLSPVKHRYSSYLGRPWKMYSRAVVMESYIDDAIAEEGWAGWLNSGDEVLK TLYFGEFKNYGPKARVSKRVTWSGFHLIGFEEASYFSVGKFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 510 Download |
| MCIVDMALFW VLLVNALLLV DASSRDMPFA YQNDLQRHCS STTYTSLCVQ NLREFRHGSL 60 QGLDFVSFLV NKTISHSNML TPPLSSSMSS SELVSLEVSD DTLPSTSVSD YCERLIKMST 120 RRLGQVMEAL NSSSRKRHSK HDVQTWLSAA MTFQQACKDS ILDSGDSSSS SISRMTQKMD 180 HLSRLVSNSL ALVDTIMENP KPETKSTVLP RWVTAGERRL LVGRERAHVV VAKDGSGDYR 240 TVMEAVTAAH GHGKDQTVIV GGDSYAGGTS VPDTATMTVT GDGFIARDIG IKNNAGPRGQ 300 QAIALSITSD QSVLYRCSIS GYQDTLYAAA LRQFYRECDI YGTIDFIFGN AAAVFQSCNI 360 FLRRPYGVKA YNVILANGRT DQRQNSGFAL HSCRIRTDTD LSPVKHRYSS YLGRPWKMYS 420 RAVVMESYID DAIAEEGWAG WLNSGDEVLK TLYFGEFKNY GPKARVSKRV TWSGFHLIGF 480 EEASYFSVGK FIDGVNWLPT TGVSFTSGI* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 2.0e-114 | 35 | 509 | 526 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02170 | PLN02170 | 2.0e-116 | 135 | 509 | 419 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 5.0e-117 | 112 | 509 | 438 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-128 | 228 | 494 | 300 | + Pectinesterase. | ||
| PLN02698 | PLN02698 | 0 | 23 | 509 | 496 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB57671.1 | 0 | 112 | 509 | 98 | 510 | pectinesterase [Citrus sinensis] |
| GenBank | ABK24883.1 | 0 | 39 | 509 | 69 | 568 | unknown [Picea sitchensis] |
| RefSeq | NP_197586.1 | 0 | 21 | 494 | 21 | 495 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002277293.1 | 0 | 27 | 509 | 1 | 479 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002516196.1 | 0 | 8 | 509 | 6 | 526 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 227 | 509 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 228 | 509 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 6e-19 | 274 | 468 | 88 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 6e-19 | 274 | 468 | 88 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 6e-19 | 274 | 468 | 88 | 315 | A Chain A, Pectin Methylesterase From Carrot |
