y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10003818m |
Family | CE8 |
Protein Properties | Length: 735 Molecular Weight: 78919.9 Isoelectric Point: 6.5141 |
Chromosome | Chromosome/Scaffold: 6 Start: 9470440 End: 9472799 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 250 | 545 | 0 |
DIVVAQDGSGQYKTINEALLNVPKKKNTTFVVHIKGGIYKEYVQVNRSMTHLVFIGDGSDKTVITGDKNYKDGITTYKTATVAIVGDHFIAKNIGFENTA GPIKHQAVAIRVLADQSIFYNCRFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVLQGCTIV GEPDYLAVKETSKSYLGRPWKEFSRTIIMNTFIPDFIPPEGWQPWLGNFGLETLFYSEVRNIGPGSGLTKRVTWPGIKKLSEEEILTFTPAQYIQG |
Full Sequence |
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Protein Sequence Length: 735 Download |
MSYGSYDDDA KRRKRYIIIS VSSVLLISMV VAVTIGVSVN KNEGEEEITT SVKAIKEVCA 60 PTDYKKTCED TLRKDAQNTS DPLELVKTAF NVTMKQISDV AKKSQTMIEL QKDPRAKMAL 120 DQCKELMDYA IGELSNSFEE LGKFEFHKID EALVKLRLWL SATISHEETC LEGFQGTQGD 180 AGETIKKALK TAVQLTHNGL AMVSEMSSYL GQLQIPEMSS RRLLSQDFPS WMDARARRLL 240 NAPMSEVKPD IVVAQDGSGQ YKTINEALLN VPKKKNTTFV VHIKGGIYKE YVQVNRSMTH 300 LVFIGDGSDK TVITGDKNYK DGITTYKTAT VAIVGDHFIA KNIGFENTAG PIKHQAVAIR 360 VLADQSIFYN CRFDGYQDTL YAHSHRQFYR DCTISGTIDF LFGDAAAVFQ NCTLLVRKPL 420 PNQACPITAH GRKDPRESTG FVLQGCTIVG EPDYLAVKET SKSYLGRPWK EFSRTIIMNT 480 FIPDFIPPEG WQPWLGNFGL ETLFYSEVRN IGPGSGLTKR VTWPGIKKLS EEEILTFTPA 540 QYIQGDAWIP GKGVPYIPGL FSGNNSATDA TSPGSSETSS SSNTTGPSAY PSTATSPSNS 600 PPAGHHGAPP ARPSAVISPS TSPPAGHHGA PPATPSAVIS PSTSPPAGHH GSPQASPTTV 660 VSPSASPPSD YLGSLSTSPS VSPSASPSIS PSASPIVSPS ASPTESPSAS STSPSMSPSD 720 SPESSVEVGS EDTI* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 2.0e-162 | 2 | 556 | 587 | + pectinesterase | ||
PLN02217 | PLN02217 | 0 | 1 | 653 | 655 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 0 | 33 | 557 | 543 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 250 | 546 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 43 | 561 | 533 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC42986.1 | 0 | 1 | 648 | 1 | 662 | putative pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_187212.1 | 0 | 1 | 648 | 1 | 662 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_198139.1 | 0 | 1 | 680 | 1 | 678 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002512459.1 | 0 | 1 | 560 | 1 | 579 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 252 | 561 | 6 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 245 | 560 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 2e-21 | 261 | 550 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-21 | 261 | 550 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-21 | 261 | 550 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |