| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10004445m |
| Family | AA1 |
| Protein Properties | Length: 583 Molecular Weight: 65647.9 Isoelectric Point: 10.2806 |
| Chromosome | Chromosome/Scaffold: 7 Start: 7245789 End: 7248969 |
| Description | SKU5 similar 4 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 84 | 537 | 0 |
| KQQGILINGQFPGPHIDAITNDNIIISVFNYLKEPFLMSWNGVQQRKNSWQDGVIGTTCPIPPGKNFTYIIQVKDQIGSFFYFPSLAFHKAAGAFGAIRV WSRPRIPVPFPSPDGDFWLLAGDWYKTNHYVLRRLLEAGRNLPMPDGVLINGRGWGGNTFTVQPGKTYRFRISNVGVATSLNFRIQGHAMKLVEVEGSHT VQNIYTSLDVHLGQSYSVLVTANQAPQDYYIVISSRFTRRVLTTTAILHYSNSRRGVSGPVPNGPTLSIASSLYQARTIKRNLTASGPRPNPQGSYHYGL IKPGRTIILANSAPWINGKQRYAVNGASFVAPDTPLKLADYFKIPGVFNLGSIPTSPSGGSGGYLQSSVMAANFREYIEIVFQNWENSIQSWHISGYSFF VVGMDGGLWTQGSRAKYNLRDAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSES | |||
| Full Sequence |
|---|
| Protein Sequence Length: 583 Download |
| RFYKILCIWI YTSSQSETQH INIIQSPKER NQKEREKEKT KMRDSCKVSV ILLLVLINGV 60 FGDNPYRFFT WKITYGDIYP LGVKQQGILI NGQFPGPHID AITNDNIIIS VFNYLKEPFL 120 MSWNGVQQRK NSWQDGVIGT TCPIPPGKNF TYIIQVKDQI GSFFYFPSLA FHKAAGAFGA 180 IRVWSRPRIP VPFPSPDGDF WLLAGDWYKT NHYVLRRLLE AGRNLPMPDG VLINGRGWGG 240 NTFTVQPGKT YRFRISNVGV ATSLNFRIQG HAMKLVEVEG SHTVQNIYTS LDVHLGQSYS 300 VLVTANQAPQ DYYIVISSRF TRRVLTTTAI LHYSNSRRGV SGPVPNGPTL SIASSLYQAR 360 TIKRNLTASG PRPNPQGSYH YGLIKPGRTI ILANSAPWIN GKQRYAVNGA SFVAPDTPLK 420 LADYFKIPGV FNLGSIPTSP SGGSGGYLQS SVMAANFREY IEIVFQNWEN SIQSWHISGY 480 SFFVVGMDGG LWTQGSRAKY NLRDAVSRST VQVYPRAWTA IYIALDNVGM WNIRSESWAR 540 QYLGQQFYLR VYTSSTSYRD EYPPPKNALM CGRARGRHTR PF* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 0 | 50 | 579 | 530 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 48 | 579 | 532 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 50 | 579 | 532 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 47 | 576 | 540 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 51 | 575 | 546 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95805.1 | 0 | 43 | 582 | 5 | 544 | unknown [Populus trichocarpa] |
| RefSeq | NP_193932.1 | 0 | 42 | 582 | 1 | 541 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002272880.1 | 0 | 42 | 582 | 1 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002332613.1 | 0 | 43 | 582 | 5 | 544 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518462.1 | 0 | 57 | 582 | 17 | 541 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 67 | 572 | 4 | 539 | A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum |
| PDB | 1asq_A | 0 | 67 | 572 | 4 | 539 | A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum |
| PDB | 1asp_B | 0 | 67 | 572 | 4 | 539 | A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum |
| PDB | 1asp_A | 0 | 67 | 572 | 4 | 539 | A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum |
| PDB | 1aso_B | 0 | 67 | 572 | 4 | 539 | A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX071513 | 289 | 42 | 330 | 0 |
| ES909314 | 280 | 42 | 321 | 0 |
| ES904197 | 280 | 42 | 321 | 0 |
| EX109995 | 298 | 22 | 319 | 0 |
| CF652795 | 272 | 42 | 313 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
