| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10004461m |
| Family | AA1 |
| Protein Properties | Length: 577 Molecular Weight: 65376 Isoelectric Point: 8.9094 |
| Chromosome | Chromosome/Scaffold: 7 Start: 636654 End: 638961 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 31 | 554 | 0 |
| KIRRFKWEVKYEFKSPDCVQKLVITINGKFPGPTIKAQQGDTIVVELKNSFMTENVAVHWHGIRQIGTPWFDGVEGVTQCPILPGEVFTYQFVVDRPGTY MYHSHYGMQRESGLIGMIRVSPPVTEPEPFSYDYDRNVLLTDWYHKSMLESATGLASRPFKWVGEPESLLIQGRGRFNCSNDPGLLSRACNASNADCSRF VLTVIPGKTYRLRLGSLTALSALNFQIEGHNLTVVETDGHYVEPFTVKNLFIYSGETYSVLIKADQNPSRNYWITTSIVSRPANTSQATAVLNYYPNHPR RRPPTPESSNLQPKWNDTRPRLAQSLAIKARRGFVHTPPENSDRVIVLLNTQNEVNGYRRWSVNNVSYLHPKTPYLIALKQNLTDAFDWGFTPPENYDSG NYDIFATPQNVNAKTSDGIYRLRFNTTVDVILQNANTMNAKNSETHPWHLHGHDFWVVGQGEGKFNESEDPKRYNRVDPIMKNTVAVHPFGWTALRFRAD NPGVWSFHCHIESHFFMGMGIVFE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 577 Download |
| MRPKSDTVHV FNLTFLCFIA LFFSSALGQG KIRRFKWEVK YEFKSPDCVQ KLVITINGKF 60 PGPTIKAQQG DTIVVELKNS FMTENVAVHW HGIRQIGTPW FDGVEGVTQC PILPGEVFTY 120 QFVVDRPGTY MYHSHYGMQR ESGLIGMIRV SPPVTEPEPF SYDYDRNVLL TDWYHKSMLE 180 SATGLASRPF KWVGEPESLL IQGRGRFNCS NDPGLLSRAC NASNADCSRF VLTVIPGKTY 240 RLRLGSLTAL SALNFQIEGH NLTVVETDGH YVEPFTVKNL FIYSGETYSV LIKADQNPSR 300 NYWITTSIVS RPANTSQATA VLNYYPNHPR RRPPTPESSN LQPKWNDTRP RLAQSLAIKA 360 RRGFVHTPPE NSDRVIVLLN TQNEVNGYRR WSVNNVSYLH PKTPYLIALK QNLTDAFDWG 420 FTPPENYDSG NYDIFATPQN VNAKTSDGIY RLRFNTTVDV ILQNANTMNA KNSETHPWHL 480 HGHDFWVVGQ GEGKFNESED PKRYNRVDPI MKNTVAVHPF GWTALRFRAD NPGVWSFHCH 540 IESHFFMGMG IVFESGIDRV SSNLPSSIMG CGQTKR* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 1.0e-88 | 48 | 556 | 539 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| TIGR03389 | laccase | 2.0e-108 | 30 | 553 | 553 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| PLN02604 | PLN02604 | 0 | 7 | 576 | 572 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 0 | 32 | 574 | 547 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02191 | PLN02191 | 0 | 16 | 576 | 566 | + L-ascorbate oxidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY47050.1 | 0 | 29 | 576 | 32 | 574 | ascorbate oxidase [Solanum lycopersicum] |
| DDBJ | BAB86897.1 | 0 | 28 | 575 | 21 | 562 | syringolide-induced protein B13-1-1 [Glycine max] |
| RefSeq | NP_195693.1 | 0 | 1 | 576 | 2 | 582 | L-ascorbate oxidase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002306323.1 | 0 | 13 | 575 | 4 | 565 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528975.1 | 0 | 15 | 575 | 17 | 571 | l-ascorbate oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 31 | 576 | 2 | 543 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1asq_A | 0 | 31 | 576 | 2 | 543 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1asp_B | 0 | 31 | 576 | 2 | 543 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1asp_A | 0 | 31 | 576 | 2 | 543 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1aso_B | 0 | 31 | 576 | 2 | 543 | A Chain A, Bacillus Subtilis Pectate Lyase |
