Basic Information | |
---|---|
Species | Capsella rubella |
Cazyme ID | Carubv10004468m |
Family | GH100 |
Protein Properties | Length: 572 Molecular Weight: 65046.5 Isoelectric Point: 6.5647 |
Chromosome | Chromosome/Scaffold: 7 Start: 2052902 End: 2058114 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH100 | 103 | 558 | 0 |
SHPMVGEAWDALRRSMVYFRGQPVGTIAAVDNSEEKLNYDQVFVRDFVPSALAFLMNGEPDIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVFHDP VRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLADMPECQKGIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFM ALRCALLLLKHDGEGKEMVEQIVKRLHALSYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPAHGGFFIGNVSPARMDFRWFA LGNCIAILSSLATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRAIEVAEAR LHKDHWPEYYDGKVGRYVGKQSRKNQTWSIAGYLVAKMMLEDPSHVGMVSLEEDKQ |
Full Sequence |
---|
Protein Sequence Length: 572 Download |
MSAFNMSVDV NQNGNMKNAD SSFTVDDIDD IDFSKLLEKP RPLNIDRLRS LDERSLTELT 60 GSPQLRNADN ASRAQDHSEY VISPSVGKRS GFNTPRSLHG FESHPMVGEA WDALRRSMVY 120 FRGQPVGTIA AVDNSEEKLN YDQVFVRDFV PSALAFLMNG EPDIVKNFIL KTLRLQSWEK 180 KIDRFQLGEG VMPASFKVFH DPVRNHETLI ADFGESAIGR VAPVDSGFWW IILLRAYTKS 240 TGDSSLADMP ECQKGIRLIL SLCLSEGFDT FPTLLCADGC CMIDRRMGVY GYPIEIQALF 300 FMALRCALLL LKHDGEGKEM VEQIVKRLHA LSYHMRSYFW LDLKQLNDIY RYKTEEYSHT 360 AVNKFNVIPD SLPEWVFDFM PAHGGFFIGN VSPARMDFRW FALGNCIAIL SSLATPEQST 420 AIMDLIESRW EELVGEMPLK VCYPAIESHE WRIVTGCDPK NTRWSYHNGG SWPVLLWLLT 480 AACIKTGRPQ IARRAIEVAE ARLHKDHWPE YYDGKVGRYV GKQSRKNQTW SIAGYLVAKM 540 MLEDPSHVGM VSLEEDKQMK PVMRRSNSWT C* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam06202 | GDE_C | 0.003 | 291 | 533 | 256 | + Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33). | ||
PLN02973 | PLN02973 | 0 | 1 | 571 | 571 | + beta-fructofuranosidase | ||
PLN03005 | PLN03005 | 0 | 21 | 571 | 554 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 109 | 545 | 438 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 109 | 560 | 458 | + beta-fructofuranosidase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004135 | amylo-alpha-1,6-glucosidase activity |
GO:0005978 | glycogen biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH20183.1 | 0 | 1 | 571 | 1 | 571 | AT4G34860 [Arabidopsis thaliana] |
EMBL | CAP59642.1 | 0 | 6 | 570 | 4 | 572 | putative neutral invertase [Vitis vinifera] |
RefSeq | NP_195212.1 | 0 | 1 | 571 | 1 | 571 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002276670.1 | 0 | 6 | 570 | 4 | 571 | PREDICTED: similar to putative neutral invertase [Vitis vinifera] |
RefSeq | XP_002306166.1 | 0 | 9 | 570 | 7 | 572 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
ES848839 | 359 | 205 | 561 | 0 |
EX132602 | 288 | 199 | 486 | 0 |
DY262604 | 313 | 92 | 404 | 0 |
DY262604 | 31 | 418 | 448 | 0.003 |
DY262604 | 90 | 402 | 482 | 0.055 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|