Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10004474m |
Family | CE8 |
Protein Properties | Length: 570 Molecular Weight: 64037.5 Isoelectric Point: 8.0715 |
Chromosome | Chromosome/Scaffold: 7 Start: 2671333 End: 2674790 |
Description | pectin methylesterase 44 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 256 | 552 | 0 |
DVTVALDGTGNFTKIMDAIKEAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGIDVTIISGSRSYVDGWTTFRSATFAVSGRGFLARDITFQNTA GPEKHQAVALRSDSDLSVFYRCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDKNQPSGFSIQFSNIS ADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGAGLNSRVKWPGYHVFNNSDQATNFTVSQFIKG |
Full Sequence |
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Protein Sequence Length: 570 Download |
TSISSNSNHK LSFLFLFILF IIATNLSNFK KKKRERERRE MSFLKYFLIF LIMFGLCVSS 60 EENMQYEYLK VPASEFVSSI NTIVEVIRQV SSILSQFADF SGDRRLQNAV SDCIDLLDFS 120 TEELSWSASA SENPKGKGNG TGNVASDTRT WLSAALSNQD TCMEGFDGTS GLVKTLVAGS 180 LDQLYSMLRE LLPLVQTDEK PTKPISKPGP IAKGPKAPPG RKLRDTEYDD DESLEFPDWV 240 RSEDRKLLET KGKSYDVTVA LDGTGNFTKI MDAIKEAPDY SSTRFVIYIK KGLYLENVEI 300 KKKKWNIVML GDGIDVTIIS GSRSYVDGWT TFRSATFAVS GRGFLARDIT FQNTAGPEKH 360 QAVALRSDSD LSVFYRCAMR GYQDTLYTHT MRQFYRECTI TGTVDFIFGD GTVVFQNCQI 420 LAKRGLPNQK NTITAQGRKD KNQPSGFSIQ FSNISADADL VPYLNTTRTY LGRPWKLYSR 480 TVFIRNNMSD VVRPEGWLEW NADFALDTLF YGEFMNYGPG AGLNSRVKWP GYHVFNNSDQ 540 ATNFTVSQFI KGNLWLPSTG VTFSDGLNM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 4.0e-169 | 101 | 567 | 471 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 4.0e-171 | 103 | 569 | 471 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 41 | 567 | 533 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 256 | 553 | 298 | + Pectinesterase. | ||
PLN02506 | PLN02506 | 0 | 56 | 567 | 521 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABM06040.1 | 0 | 163 | 567 | 1 | 402 | At4g33220 [Arabidopsis thaliana] |
DDBJ | BAF42041.1 | 0 | 52 | 567 | 21 | 507 | pectin methylesterase 4 [Pyrus communis] |
EMBL | CAB36796.1 | 0 | 97 | 567 | 8 | 475 | pectinesterase-like protein [Arabidopsis thaliana] |
RefSeq | NP_567917.4 | 0 | 41 | 567 | 1 | 523 | enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q43062 | 0 | 46 | 564 | 27 | 517 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 256 | 567 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 256 | 567 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 4e-23 | 267 | 524 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 4e-23 | 267 | 524 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 7e-23 | 267 | 521 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |