| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10004588m |
| Family | GT43 |
| Protein Properties | Length: 524 Molecular Weight: 58818.7 Isoelectric Point: 9.7213 |
| Chromosome | Chromosome/Scaffold: 7 Start: 1107393 End: 1110259 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 180 | 425 | 0 |
| MHSLMLVPYDLVWIVVEAGGATNETASIIAKSGLRTIHLGIDQRMPNTWEDRSKLEVFMRLQALRVVREEKLDGIVMFADDSNMHSMEFFDEIQNVKWFG TVSVGILAHSGNAEEMVISMDKRKEKETGEEGESSSLPVQGPACNSTDQLIGWHIFNTLPYAGKSAVYIDDVAAVLPQKLEWSGFVLNSRLLWEEAENKP EWIKDFGSLNENEGVESPLSLLKDPTMVEPLGSCGRQVLLWWLRVE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 524 Download |
| MKLSALHQSY LNRRSNSFRS PTSLDSSVDG SGKSLVAVFW LFVHCLCCLV SLVLGFRFSR 60 LVFFFLFSTS STNLYSAPFR PDLPVKHLDV HTIGRHLDPG ANVTVAAATR SSRVVVGRHG 120 IRIRPWPHPN PAEVMKAHQI IERVQKEQKT IFGMKTSKMV IAVTPTYVRT FQALHLSGVM 180 HSLMLVPYDL VWIVVEAGGA TNETASIIAK SGLRTIHLGI DQRMPNTWED RSKLEVFMRL 240 QALRVVREEK LDGIVMFADD SNMHSMEFFD EIQNVKWFGT VSVGILAHSG NAEEMVISMD 300 KRKEKETGEE GESSSLPVQG PACNSTDQLI GWHIFNTLPY AGKSAVYIDD VAAVLPQKLE 360 WSGFVLNSRL LWEEAENKPE WIKDFGSLNE NEGVESPLSL LKDPTMVEPL GSCGRQVLLW 420 WLRVEARADS KFPPGWIIDP PLEITVAAKR TPWPDVPPEP PTKKKDQMPL SQGGNTVVVI 480 PKQQQHSTKI RKPKRRSKRN KHEPKLTDTT QVSSSMSKRQ ERN* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 2.0e-19 | 129 | 373 | 248 | + transferase, transferring glycosyl groups | ||
| cd00218 | GlcAT-I | 1.0e-60 | 158 | 426 | 276 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| pfam03360 | Glyco_transf_43 | 1.0e-61 | 179 | 426 | 258 | + Glycosyltransferase family 43. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB16800.1 | 0 | 19 | 523 | 38 | 544 | UDP-glucuronyltransferase-like protein [Arabidopsis thaliana] |
| EMBL | CBI21374.1 | 0 | 1 | 466 | 1 | 430 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_195407.2 | 0 | 1 | 523 | 1 | 525 | IRX14 (irregular xylem 14); transferase, transferring glycosyl groups / xylosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_201524.1 | 0 | 1 | 515 | 1 | 491 | glycosyl transferase family 43 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283249.1 | 0 | 1 | 466 | 1 | 468 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.0000000008 | 163 | 444 | 8 | 253 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1v84_A | 0.0000000008 | 163 | 444 | 8 | 253 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1v83_B | 0.0000000008 | 163 | 444 | 8 | 253 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1v83_A | 0.0000000008 | 163 | 444 | 8 | 253 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1v82_B | 0.0000000008 | 163 | 444 | 8 | 253 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
