| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10004652m |
| Family | GH9 |
| Protein Properties | Length: 497 Molecular Weight: 55091.6 Isoelectric Point: 4.7534 |
| Chromosome | Chromosome/Scaffold: 7 Start: 304298 End: 307265 |
| Description | glycosyl hydrolase 9B18 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 28 | 487 | 0 |
| DYSDALSKSILFFEGQRSGYLPNDQRMTWRRNSGLSDGWTHNTDLTGGYYDAGDNVKFNFPMAFTTTMLAWSVIEFGELMPPSELRNSLVALRWSSNYLL KSVSQLPNRIFVQVGDPIADHNCWERPEDMDTPRTAYAVNAPNPASEVAGETTAAFSAASIAFRSSDPGYSQTLLQNAVKTFQFADTYRGAYSSNDDIKN DVCPFYCDFNGFQDELLWGAAWLRKATGDDSYLNYIESNREPFGANDNVDEFGWDNKVGGLNVLVSKEVIEGKMYNLEAYKASAESFMCSLVPESPGPHV EYTPAGLLYKPGGSQLQHATTISFILLVYAQYLSRSSLSLNCGTLTVPPDYLRRLAKKQVDYILGENPMGLSYMVGYGERYPKRIHHRGSSLPSIADHPG AIGCKDGSLYFNSTEPNPNVLIGAVVGGPGEDDTYDDNRSDFRKSEPTTYINAPFVGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 497 Download |
| MNLHLFLLWL VVSFFLHLLP IMSSSQHDYS DALSKSILFF EGQRSGYLPN DQRMTWRRNS 60 GLSDGWTHNT DLTGGYYDAG DNVKFNFPMA FTTTMLAWSV IEFGELMPPS ELRNSLVALR 120 WSSNYLLKSV SQLPNRIFVQ VGDPIADHNC WERPEDMDTP RTAYAVNAPN PASEVAGETT 180 AAFSAASIAF RSSDPGYSQT LLQNAVKTFQ FADTYRGAYS SNDDIKNDVC PFYCDFNGFQ 240 DELLWGAAWL RKATGDDSYL NYIESNREPF GANDNVDEFG WDNKVGGLNV LVSKEVIEGK 300 MYNLEAYKAS AESFMCSLVP ESPGPHVEYT PAGLLYKPGG SQLQHATTIS FILLVYAQYL 360 SRSSLSLNCG TLTVPPDYLR RLAKKQVDYI LGENPMGLSY MVGYGERYPK RIHHRGSSLP 420 SIADHPGAIG CKDGSLYFNS TEPNPNVLIG AVVGGPGEDD TYDDNRSDFR KSEPTTYINA 480 PFVGVLAYFA ANPSFS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03009 | PLN03009 | 0 | 20 | 496 | 477 | + cellulase | ||
| PLN02308 | PLN02308 | 0 | 20 | 494 | 475 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 25 | 490 | 466 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 28 | 487 | 466 | + Glycosyl hydrolase family 9. | ||
| PLN02613 | PLN02613 | 0 | 28 | 487 | 463 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT54548.1 | 0 | 3 | 493 | 8 | 493 | endo-1,4-beta-glucanase [Dimocarpus longan] |
| EMBL | CAB38821.1 | 0 | 22 | 496 | 1 | 475 | putative endo-1, 4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_568050.1 | 0 | 1 | 496 | 1 | 497 | AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002275280.1 | 0 | 20 | 494 | 20 | 493 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305460.1 | 0 | 22 | 496 | 1 | 474 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 27 | 491 | 3 | 430 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1ksc_A | 0 | 27 | 491 | 3 | 430 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1ks8_A | 0 | 27 | 491 | 3 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 28 | 487 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 28 | 487 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
