y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10004671m |
Family | GH1 |
Protein Properties | Length: 492 Molecular Weight: 55927.7 Isoelectric Point: 5.3382 |
Chromosome | Chromosome/Scaffold: 7 Start: 14478886 End: 14483263 |
Description | beta glucosidase 42 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 19 | 481 | 0 |
RSSFPSTFTFGVATSAYQIEGGWNEGKKGPSIWDKFTHLEGKILDGCNGDVAVDHYHRYKEDIELIGQLGFSAYRFSISWSRIFPDGLGTEVNEEGIAFY NNLINGLLEKGIQPFVTLYHWDLPSHLQDAIGGWTNRKIVDYFGLYADACFANFGDRVKHWITINEPLQTSVNGHCIGIFAPGRNEKPLIEPYLASHHQV LAHATAVSIYRSKYKESQGGQIGLSVDCEWAEPNSEKLEDKVAADRRIDFQLGWFLDPLFFGDYPASMRQKLGENLPTFTPEEKELMLQNSWDFLGVNHY TSRLISHVSNVEAESDYYSAQEMERAVEYENGEPIGERAASDWLYVVPWGIRKTLNYISRKYNHPPIYITENGMDDEDDGSASIHDMLDDKRRVAYFKSY LANVSQAIIDGVDIKGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLTRHPKSSAYWFMKFLK |
Full Sequence |
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Protein Sequence Length: 492 Download |
MAQKLNLAAN LAVPPVTHRS SFPSTFTFGV ATSAYQIEGG WNEGKKGPSI WDKFTHLEGK 60 ILDGCNGDVA VDHYHRYKED IELIGQLGFS AYRFSISWSR IFPDGLGTEV NEEGIAFYNN 120 LINGLLEKGI QPFVTLYHWD LPSHLQDAIG GWTNRKIVDY FGLYADACFA NFGDRVKHWI 180 TINEPLQTSV NGHCIGIFAP GRNEKPLIEP YLASHHQVLA HATAVSIYRS KYKESQGGQI 240 GLSVDCEWAE PNSEKLEDKV AADRRIDFQL GWFLDPLFFG DYPASMRQKL GENLPTFTPE 300 EKELMLQNSW DFLGVNHYTS RLISHVSNVE AESDYYSAQE MERAVEYENG EPIGERAASD 360 WLYVVPWGIR KTLNYISRKY NHPPIYITEN GMDDEDDGSA SIHDMLDDKR RVAYFKSYLA 420 NVSQAIIDGV DIKGYFAWSL LDNFEWAQGY TKRFGLVYVD YKNGLTRHPK SSAYWFMKFL 480 KGDEENKGKK D* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 5.0e-124 | 19 | 480 | 477 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 4.0e-129 | 19 | 480 | 473 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-158 | 19 | 476 | 467 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam00232 | Glyco_hydro_1 | 0 | 18 | 476 | 462 | + Glycosyl hydrolase family 1. | ||
TIGR03356 | BGL | 0 | 23 | 476 | 457 | + beta-galactosidase. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP51059.1 | 0 | 19 | 490 | 20 | 489 | latex cyanogenic beta glucosidase [Hevea brasiliensis] |
GenBank | ABW76289.1 | 0 | 19 | 490 | 23 | 492 | beta-glucosidase G4 [Medicago truncatula] |
RefSeq | NP_001031975.1 | 0 | 1 | 487 | 1 | 486 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_198505.2 | 0 | 1 | 491 | 1 | 490 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002514775.1 | 0 | 19 | 491 | 22 | 500 | beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 19 | 481 | 14 | 487 | A Chain A, Crystal Structure Of A Possible 3-Hydroxyisobutyrate Dehydrogenase From Pseudomonas Aeruginosa Pao1 |
PDB | 3gnp_A | 0 | 19 | 481 | 14 | 487 | A Chain A, Crystal Structure Of A Possible 3-Hydroxyisobutyrate Dehydrogenase From Pseudomonas Aeruginosa Pao1 |
PDB | 3gno_A | 0 | 19 | 481 | 14 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 19 | 481 | 17 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 19 | 481 | 17 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX119123 | 299 | 1 | 299 | 0 |
ES903539 | 285 | 3 | 287 | 0 |
FY453941 | 275 | 12 | 286 | 0 |
FY429396 | 272 | 196 | 467 | 0 |
ES906118 | 267 | 1 | 267 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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