y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10004986m |
Family | GH17 |
Protein Properties | Length: 396 Molecular Weight: 43956.4 Isoelectric Point: 8.5185 |
Chromosome | Chromosome/Scaffold: 7 Start: 8676911 End: 8678618 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 32 | 350 | 0 |
LGINYGQVGNNLPSPDKVINLLRSLRITKTRIYDTNPQILTSFANSNIEIIVTIENQVLPMLQDPQQALQWVNSHIKPYVPATRITGIMVGNELFTDEDS SLIGYMMPAIINIHKALVQLGLDRYIQVSSPSSLAVLGESYPPSAGSFKPEVSSVMQQLLAFLEATKSPYWINAYPYFAYKDNPKEIPIDYVLFNRNVGM TDPNTRLHYDNMMYAQVDAVAFAAAKLGYRNIEVRVAETGWPSKGDAGEVGASPMNAATYNRNLMMRQFAGEGTPARRSERLDVYIFALFNEDMKPGPTS EKNYGIFRPDGSLAYNLGF |
Full Sequence |
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Protein Sequence Length: 396 Download |
MSSSTRLSNL VHVFLMLSLV FSGNILQRVT SLGINYGQVG NNLPSPDKVI NLLRSLRITK 60 TRIYDTNPQI LTSFANSNIE IIVTIENQVL PMLQDPQQAL QWVNSHIKPY VPATRITGIM 120 VGNELFTDED SSLIGYMMPA IINIHKALVQ LGLDRYIQVS SPSSLAVLGE SYPPSAGSFK 180 PEVSSVMQQL LAFLEATKSP YWINAYPYFA YKDNPKEIPI DYVLFNRNVG MTDPNTRLHY 240 DNMMYAQVDA VAFAAAKLGY RNIEVRVAET GWPSKGDAGE VGASPMNAAT YNRNLMMRQF 300 AGEGTPARRS ERLDVYIFAL FNEDMKPGPT SEKNYGIFRP DGSLAYNLGF STMSTTTANS 360 ESVTYSSSAT KAKRSLEYWT ILILAMIQVV ISRLF* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-7 | 261 | 341 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 9.0e-89 | 32 | 350 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM96962.1 | 0 | 1 | 393 | 4 | 406 | putative beta-1,3-glucanase precursor [Arabidopsis thaliana] |
EMBL | CAA16806.1 | 0 | 5 | 376 | 7 | 378 | beta-1, 3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_174300.2 | 0 | 1 | 393 | 4 | 406 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_193568.2 | 0 | 5 | 395 | 7 | 397 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002332000.1 | 0 | 10 | 373 | 10 | 375 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 32 | 350 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 32 | 351 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 32 | 351 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 32 | 351 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 32 | 351 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |