| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10005077m |
| Family | GH14 |
| Protein Properties | Length: 371 Molecular Weight: 41796.6 Isoelectric Point: 4.9516 |
| Chromosome | Chromosome/Scaffold: 7 Start: 10167039 End: 10170157 |
| Description | beta-amylase 5 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 17 | 369 | 0 |
| YVMLPLGVVNVENVVTDPETLETQLKRLKEEAGIDGVMVDVWWGIIESKGPKQYDWTAYKTLFHLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPKWVRD VGDTDPDIYYTNRKGTRDIEYLSIGVDNVPLFAGRTAVQMYSDYMSSFKENMADLIEAGVIVDIEVGLGPAGELRYPSYPQSQGWVFPGIGEFQCYDKYL KKDFKEAAAKAGHPEWDLPEDAGEYNDKPEETGFFKRNGTYVSEEGKFFLTWYSNKLIFHGDQILGEANKIFAGLKLNLAAKVSGIHWLYNHHSHAAELT AGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQEV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 371 Download |
| MAANYNEKLL LNYVPVYVML PLGVVNVENV VTDPETLETQ LKRLKEEAGI DGVMVDVWWG 60 IIESKGPKQY DWTAYKTLFH LIARLGLKIQ AIMSFHQCGG NVGDIVTIPI PKWVRDVGDT 120 DPDIYYTNRK GTRDIEYLSI GVDNVPLFAG RTAVQMYSDY MSSFKENMAD LIEAGVIVDI 180 EVGLGPAGEL RYPSYPQSQG WVFPGIGEFQ CYDKYLKKDF KEAAAKAGHP EWDLPEDAGE 240 YNDKPEETGF FKRNGTYVSE EGKFFLTWYS NKLIFHGDQI LGEANKIFAG LKLNLAAKVS 300 GIHWLYNHHS HAAELTAGYY NLFKRDGYRP IARMLSKHYG ILNFTCLEMK DTDNTAEALS 360 APQELVQEVI * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 3.0e-120 | 13 | 370 | 361 | + beta-amylase | ||
| PLN02905 | PLN02905 | 1.0e-142 | 13 | 370 | 362 | + beta-amylase | ||
| PLN00197 | PLN00197 | 1.0e-148 | 14 | 369 | 360 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 2.0e-164 | 14 | 369 | 359 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 1 | 370 | 370 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA07842.1 | 0 | 1 | 370 | 1 | 370 | beta-amylase [Arabidopsis thaliana] |
| DDBJ | BAH20736.1 | 0 | 1 | 370 | 1 | 370 | beta-amylase [Raphanus sativus] |
| EMBL | CAB10300.1 | 0 | 1 | 370 | 1 | 371 | beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_567460.1 | 0 | 1 | 370 | 1 | 370 | BAM5 (BETA-AMYLASE 5); beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_849389.1 | 0 | 1 | 370 | 1 | 370 | BAM5 (BETA-AMYLASE 5); beta-amylase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ukp_D | 0 | 3 | 370 | 1 | 367 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 3 | 370 | 1 | 367 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_B | 0 | 3 | 370 | 1 | 367 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_A | 0 | 3 | 370 | 1 | 367 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1v3i_A | 0 | 3 | 370 | 1 | 367 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 367 | 5 | 370 | 0 |
| CK121669 | 247 | 114 | 360 | 0 |
| EE565622 | 256 | 81 | 336 | 0 |
| EE469182 | 241 | 95 | 335 | 0 |
| GR449256 | 238 | 1 | 238 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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