Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10005163m |
Family | GH17 |
Protein Properties | Length: 347 Molecular Weight: 37786.7 Isoelectric Point: 8.7547 |
Chromosome | Chromosome/Scaffold: 7 Start: 9597656 End: 9599008 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 26 | 336 | 0 |
VGVCYGMMGNNLPSHSDTIALFREKNIRRVRLYDPNQAALNALKNSGIEVIVGVPNSDLRSLTNPSSARSWLQNNVLNYYPAVSFKYISVGNEVSPGNGG DLVLPAMRNVYDALRGANLQDRIKVSTAIDMTLIGNSFPPSSGEFRGDVRWYTDPIIGFLTSTNSALLANIYPYFSYVGNPRDISLSYALFTSPSVVVWD GSRGYQNLFDALLDVVYSAVERSGGGSIPVVVSESGWPSNGGNAASFDNARAYYTNLAARVRENRGTPKRPGRGVETYLFAMFDENQKSPEIEKNFGLFF PNKQPKFPITF |
Full Sequence |
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Protein Sequence Length: 347 Download |
MSQITPLLLL VALFTSIFNP TSGEPVGVCY GMMGNNLPSH SDTIALFREK NIRRVRLYDP 60 NQAALNALKN SGIEVIVGVP NSDLRSLTNP SSARSWLQNN VLNYYPAVSF KYISVGNEVS 120 PGNGGDLVLP AMRNVYDALR GANLQDRIKV STAIDMTLIG NSFPPSSGEF RGDVRWYTDP 180 IIGFLTSTNS ALLANIYPYF SYVGNPRDIS LSYALFTSPS VVVWDGSRGY QNLFDALLDV 240 VYSAVERSGG GSIPVVVSES GWPSNGGNAA SFDNARAYYT NLAARVRENR GTPKRPGRGV 300 ETYLFAMFDE NQKSPEIEKN FGLFFPNKQP KFPITFSAVR AGTAVE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-7 | 55 | 324 | 285 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-158 | 26 | 336 | 313 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP87281.1 | 0 | 5 | 340 | 18 | 355 | beta-1,3-glucanase [Hevea brasiliensis] |
GenBank | ABG49448.1 | 0 | 5 | 340 | 18 | 355 | beta-1,3-glucanase [Hevea brasiliensis] |
GenBank | ACZ74626.1 | 0 | 5 | 340 | 18 | 355 | beta-1,3-glucanase [Hevea brasiliensis] |
EMBL | CAB10405.1 | 0 | 4 | 297 | 1 | 299 | beta-1, 3-glucanase class I precursor [Arabidopsis thaliana] |
RefSeq | NP_193361.4 | 0 | 4 | 346 | 1 | 344 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 26 | 337 | 2 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_C | 0 | 26 | 337 | 2 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_B | 0 | 26 | 337 | 2 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_A | 0 | 26 | 337 | 2 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3em5_D | 0 | 26 | 337 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |