y
Basic Information | |
---|---|
Species | Capsella rubella |
Cazyme ID | Carubv10006192m |
Family | GT4 |
Protein Properties | Length: 837 Molecular Weight: 94988.5 Isoelectric Point: 6.9933 |
Chromosome | Chromosome/Scaffold: 7 Start: 14629575 End: 14634893 |
Description | sucrose synthase 5 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT4 | 563 | 729 | 0 |
DKKKPIIFSMARLDLVKNLTGLTEWYAKNKRLRDLVNLVIVGGFFDPTKSKDREEISEITKMHSLIEKYQLKGQFRWIAAQTDRTRNGELYRCIADTRGA FVQPAHYEAFGLTVIEAMSCGLVTFATNQGGPAEIIVDGVSGFHIDPSNGEESSDKIVDFFEKCNID |
Full Sequence |
---|
Protein Sequence Length: 837 Download |
MEITSGSLGN GIPEAMGQTR GNIKRCLEKY IEKGRRVMKL NQLMDEMEIV INDVTQRRRV 60 MEGDLGKILC FTQEAVVIPP NVAFAVRGNP GNWQYVKVNS TNLSVEALSS TQYLKLKELL 120 FDEDWANDEN ALEVDFGALD FTLPQLSLSS SIGNGMSFVS SKLGGRLNDN PQPLVDYLLS 180 LEHQGEKLMM NETLNTARKL EMSLILADVF LSELPKDTPF QAFELRFKEW GFEKGWGDSA 240 GRVKDTMRIL SEILQAPDPR NIDRFFARIP RIFNVVIFSV HGYFGQTDVL GLPDTGGQVV 300 YILDQVKALE DELLHRINSQ GLNFKPQIIV VTRLIPDAKN TKCNQELEPI FGTKHSNILR 360 IPFVTENGIL RRWVSRFDIY PYLERFTKDA TTKILDILEG KPDLIIGNYT DGNLVASLMA 420 SKLGITQATI AHALEKTKYE DSDIKWKEFD SKYHFSSQFT ADLISMNSAD FIIASTYQEI 480 AGSKERSGQY ESHMSFTLPG LYRVVSGINV FDPRFNIAAP GADDSIYFPF TAQDRRFTKF 540 YPSIDELLYS QDENGDHIGY LVDKKKPIIF SMARLDLVKN LTGLTEWYAK NKRLRDLVNL 600 VIVGGFFDPT KSKDREEISE ITKMHSLIEK YQLKGQFRWI AAQTDRTRNG ELYRCIADTR 660 GAFVQPAHYE AFGLTVIEAM SCGLVTFATN QGGPAEIIVD GVSGFHIDPS NGEESSDKIV 720 DFFEKCNIDP NYWNMFSTEG LQRISECYTW KIYANRVINM GSTYSYWRHL NKDQKLAKQR 780 YIHSFYNLQY RNLVKTIPIL SDIPRPPPPP PKPLVKPSSA KGKRTQSRLS FRLFGA* 840 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 1.0e-58 | 275 | 750 | 483 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 2.0e-116 | 274 | 757 | 484 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 5 | 796 | 795 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 20 | 796 | 781 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 7 | 550 | 547 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB11375.1 | 0 | 1 | 803 | 43 | 854 | sucrose synthase [Arabidopsis thaliana] |
EMBL | CBI27338.1 | 0 | 5 | 819 | 10 | 842 | unnamed protein product [Vitis vinifera] |
EMBL | CBI35298.1 | 0 | 3 | 817 | 9 | 828 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_198534.2 | 0 | 1 | 836 | 1 | 836 | SUS5; UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] |
RefSeq | XP_002267020.1 | 0 | 5 | 807 | 10 | 815 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 14 | 802 | 20 | 807 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 3s29_G | 0 | 14 | 802 | 20 | 807 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 3s29_F | 0 | 14 | 802 | 20 | 807 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 3s29_E | 0 | 14 | 802 | 20 | 807 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 3s29_D | 0 | 14 | 802 | 20 | 807 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO794519 | 794 | 7 | 796 | 0 |
BU103683 | 766 | 34 | 796 | 0 |
HO778590 | 270 | 267 | 536 | 0 |
HO778590 | 269 | 528 | 796 | 0 |
HO778590 | 143 | 126 | 265 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|