y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10006539m |
Family | AA1 |
Protein Properties | Length: 541 Molecular Weight: 60943.8 Isoelectric Point: 9.8543 |
Chromosome | Chromosome/Scaffold: 7 Start: 1225605 End: 1227885 |
Description | SKU5 similar 15 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 48 | 500 | 0 |
PQQVILINGQFPGPAIEAVTNNNIVVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIQPNSNWTYQFQLKDQIGTYTYFASTWMHRASGAFGALNV NQRAVITTPYPTPDGDFTLLVSDWFKMSHKDLRKRLDAGYALPLPDALLINGASKGLVFTGRQGKTYKFRISNVGIATSINFRIQNHTMSLIEVEGAHTL QESYESLDVHVGQSVTVLVTLKASVRDYFIVASTRFTKPVLTTTASLRYLGSKNAAYGPLPIGPTYHIHWSMKQARTIRMNLTANAARPNPQGSFHYGTI PINRTLVLANAATMIYGKLRYTVNRISYINPTTPLKLADWYNISGVFDFKTILSTPTTGPAHFGTSVIDVELHEFVEIVFQNDERSIQSWHMDGTSAYAV GYGSGTWNVTMRKRYNLVDAVPRHTFQVYPLSWTSILVSLDNKGMWNLRSQIW |
Full Sequence |
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Protein Sequence Length: 541 Download |
MKQTNLLLCK LFIGTLFWLG SVLVNGEDPY MFYTWTVTYG TRSPLGVPQQ VILINGQFPG 60 PAIEAVTNNN IVVNLINKLD EPFLITWNGV KQRRTTWQDG VLGTNCPIQP NSNWTYQFQL 120 KDQIGTYTYF ASTWMHRASG AFGALNVNQR AVITTPYPTP DGDFTLLVSD WFKMSHKDLR 180 KRLDAGYALP LPDALLINGA SKGLVFTGRQ GKTYKFRISN VGIATSINFR IQNHTMSLIE 240 VEGAHTLQES YESLDVHVGQ SVTVLVTLKA SVRDYFIVAS TRFTKPVLTT TASLRYLGSK 300 NAAYGPLPIG PTYHIHWSMK QARTIRMNLT ANAARPNPQG SFHYGTIPIN RTLVLANAAT 360 MIYGKLRYTV NRISYINPTT PLKLADWYNI SGVFDFKTIL STPTTGPAHF GTSVIDVELH 420 EFVEIVFQND ERSIQSWHMD GTSAYAVGYG SGTWNVTMRK RYNLVDAVPR HTFQVYPLSW 480 TSILVSLDNK GMWNLRSQIW SRRYLGQELY VRVWNDEKSL YTEADPPLNV LYCGKAKRPL 540 * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 0 | 4 | 536 | 534 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 20 | 537 | 527 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 13 | 536 | 524 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 29 | 535 | 519 | + copper ion binding / pectinesterase | ||
PLN02792 | PLN02792 | 0 | 23 | 536 | 518 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18561.1 | 0 | 7 | 539 | 69 | 601 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195433.1 | 0 | 1 | 540 | 1 | 541 | sks15 (SKU5 Similar 15); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_565554.1 | 0 | 23 | 539 | 22 | 538 | sks16 (SKU5 Similar 16); copper ion binding / pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002310164.1 | 0 | 1 | 539 | 1 | 537 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522339.1 | 0 | 1 | 539 | 1 | 540 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 33 | 506 | 6 | 516 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1asq_A | 0 | 33 | 506 | 6 | 516 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1asp_B | 0 | 33 | 506 | 6 | 516 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1asp_A | 0 | 33 | 506 | 6 | 516 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1aso_B | 0 | 33 | 506 | 6 | 516 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |