| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10006564m |
| Family | GH9 |
| Protein Properties | Length: 504 Molecular Weight: 55803.4 Isoelectric Point: 6.7831 |
| Chromosome | Chromosome/Scaffold: 7 Start: 296829 End: 298784 |
| Description | glycosyl hydrolase 9B17 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 24 | 483 | 0 |
| NYADALTKSILFFEGQRSGYLPRNQRMTWRRNSALNDGKNLNADLVGGYYDAGDNIKFHFPMAFTATMLAWSAVDFGSYMSPADLRDNLIALRWGTDYLL KTVSQLPNRIFVQVGEATPDHQCWERPEDMDTPRTAYAVEAPSPASDLAGEITAALAAASIAFKRFDPIYSKILLDNALKTFEYADSHRGSYTSNPATKL AVCPFYCSVNGYEDELLWGAAWLRRATGKDSYLKYLVDNRQSFSADSNYFEFGWDNKVGGVNVLVAKEVFEKDVAVIAPYKDTAEKLMCSFFLESPGAHM SYSPGGLLYKPGSSQLQNTVALSFLLLTYANDLSKSSQQLHCGSLMFQPDSLRRLAKRQVDYILGDNPINMSYMIGYGYRYPRQIHHRGASSPSVMTHPT AIKCLEGWNVFASPNPDPNILVGAVIGGPDIDDKFIGGRTNASETEPTTYINAPFVGLLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 504 Download |
| MKTSICSSIV VLLLVLLPTT ISHNYADALT KSILFFEGQR SGYLPRNQRM TWRRNSALND 60 GKNLNADLVG GYYDAGDNIK FHFPMAFTAT MLAWSAVDFG SYMSPADLRD NLIALRWGTD 120 YLLKTVSQLP NRIFVQVGEA TPDHQCWERP EDMDTPRTAY AVEAPSPASD LAGEITAALA 180 AASIAFKRFD PIYSKILLDN ALKTFEYADS HRGSYTSNPA TKLAVCPFYC SVNGYEDELL 240 WGAAWLRRAT GKDSYLKYLV DNRQSFSADS NYFEFGWDNK VGGVNVLVAK EVFEKDVAVI 300 APYKDTAEKL MCSFFLESPG AHMSYSPGGL LYKPGSSQLQ NTVALSFLLL TYANDLSKSS 360 QQLHCGSLMF QPDSLRRLAK RQVDYILGDN PINMSYMIGY GYRYPRQIHH RGASSPSVMT 420 HPTAIKCLEG WNVFASPNPD PNILVGAVIG GPDIDDKFIG GRTNASETEP TTYINAPFVG 480 LLAYFKANPI LDDSAFLRFS KKN* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 1.0e-164 | 22 | 483 | 465 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 6.0e-168 | 24 | 483 | 466 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 23 | 489 | 467 | + cellulase | ||
| PLN02308 | PLN02308 | 0 | 23 | 489 | 467 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 18 | 485 | 468 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK28672.1 | 0 | 24 | 489 | 25 | 490 | unknown [Arabidopsis thaliana] |
| EMBL | CAB38821.1 | 0 | 23 | 489 | 6 | 472 | putative endo-1, 4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_195611.1 | 0 | 24 | 489 | 25 | 490 | AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_568050.1 | 0 | 23 | 489 | 28 | 494 | AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Swiss-Prot | Q9SVJ4 | 0 | 1 | 490 | 1 | 494 | GUN22_ARATH RecName: Full=Endoglucanase 22; AltName: Full=Endo-1,4-beta glucanase 22; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 21 | 483 | 1 | 426 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ksc_A | 0 | 21 | 483 | 1 | 426 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ks8_A | 0 | 21 | 483 | 1 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 24 | 483 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 24 | 483 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
