| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10006565m |
| Family | GH37 |
| Protein Properties | Length: 618 Molecular Weight: 69740.9 Isoelectric Point: 5.1548 |
| Chromosome | Chromosome/Scaffold: 7 Start: 6353759 End: 6356602 |
| Description | trehalase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH37 | 92 | 606 | 0 |
| PDPKYYMDLSLKRPYNLSTAESAFKDLTSESRDLSVPVEKLESFLKEYFDGAGEDLLHHEPVDFVSDPSGFLSNVENQKVRDWAREVHVLWRNLSCRVAD SVRESPGRHTLLPLPEPVIIPGSRFREVYYWDSYWVIKGLMTSKMFTTAKGLVKNLMSLVETYGFALNGARAYYTNRSQPPLLSSMVYEIYNVTKDDELV REAIPVLVKEYEFWNSGKHKVVIRDASGYDHVLSRYYALWNMPRPESSVFDEESASGFSTMSEKQRFHRDIASAAESGCDFSTRWMRDPPNFTTMATTSV VPVDLNVFLLKMELDIAFLMEISGDKNGSDHFVKASKAREKAFETVFWNEEAGQWLDYWLSSNGDEPEAWKAENQNTNVFASNFAPIWINTISSDETLVK KVVKALKNSGLIAPAGILTSLTDSGQQWDFPNGWAPQQEMIVTGLASSSSKEAKEMAEDIARRWIRSNYLVYKKGGTMHEKLKVTELGEYGGGGEYIPQT GFGWSNGVILAFLEE | |||
| Full Sequence |
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| Protein Sequence Length: 618 Download |
| MNSLKRRNAD PITFKPFLSS PPCNFSFSFS SLIDLKRQGF TLFLLCFSLT ALMVDSDTDS 60 DSGPVILASP LVSFLQHVQL TALRSYPKKQ TPDPKYYMDL SLKRPYNLST AESAFKDLTS 120 ESRDLSVPVE KLESFLKEYF DGAGEDLLHH EPVDFVSDPS GFLSNVENQK VRDWAREVHV 180 LWRNLSCRVA DSVRESPGRH TLLPLPEPVI IPGSRFREVY YWDSYWVIKG LMTSKMFTTA 240 KGLVKNLMSL VETYGFALNG ARAYYTNRSQ PPLLSSMVYE IYNVTKDDEL VREAIPVLVK 300 EYEFWNSGKH KVVIRDASGY DHVLSRYYAL WNMPRPESSV FDEESASGFS TMSEKQRFHR 360 DIASAAESGC DFSTRWMRDP PNFTTMATTS VVPVDLNVFL LKMELDIAFL MEISGDKNGS 420 DHFVKASKAR EKAFETVFWN EEAGQWLDYW LSSNGDEPEA WKAENQNTNV FASNFAPIWI 480 NTISSDETLV KKVVKALKNS GLIAPAGILT SLTDSGQQWD FPNGWAPQQE MIVTGLASSS 540 SKEAKEMAED IARRWIRSNY LVYKKGGTMH EKLKVTELGE YGGGGEYIPQ TGFGWSNGVI 600 LAFLEEFGWP SNLSIEP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13270 | treF | 4.0e-75 | 201 | 610 | 424 | + trehalase; Provisional | ||
| PRK13271 | treA | 3.0e-79 | 201 | 605 | 413 | + trehalase; Provisional | ||
| COG1626 | TreA | 8.0e-86 | 181 | 608 | 441 | + Neutral trehalase [Carbohydrate transport and metabolism] | ||
| PLN02567 | PLN02567 | 0 | 68 | 617 | 553 | + alpha,alpha-trehalase | ||
| pfam01204 | Trehalase | 0 | 92 | 608 | 524 | + Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004555 | alpha,alpha-trehalase activity |
| GO:0005991 | trehalose metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB63620.1 | 0 | 53 | 616 | 1 | 556 | trehalase precusor isolog [Arabidopsis thaliana] |
| GenBank | AAF22127.1 | 0 | 53 | 616 | 1 | 565 | AF126425_1 trehalase [Arabidopsis thaliana] |
| RefSeq | NP_194135.1 | 0 | 15 | 616 | 20 | 625 | TRE1 (TREHALASE 1); alpha,alpha-trehalase/ trehalase [Arabidopsis thaliana] |
| RefSeq | XP_002303675.1 | 0 | 60 | 615 | 12 | 566 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518875.1 | 0 | 63 | 616 | 14 | 566 | alpha,alpha-trehalase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wyn_D | 0 | 143 | 605 | 56 | 500 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 2wyn_C | 0 | 143 | 605 | 56 | 500 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 2wyn_B | 0 | 143 | 605 | 56 | 500 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 2wyn_A | 0 | 143 | 605 | 56 | 500 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 2jjb_D | 0 | 143 | 605 | 56 | 500 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES905631 | 280 | 227 | 506 | 0 |
| EL588765 | 294 | 97 | 390 | 0 |
| GR445248 | 268 | 135 | 402 | 0 |
| EY933482 | 233 | 186 | 418 | 0 |
| EL622609 | 224 | 183 | 406 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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