| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10006679m |
| Family | GH9 |
| Protein Properties | Length: 494 Molecular Weight: 54698.9 Isoelectric Point: 6.5715 |
| Chromosome | Chromosome/Scaffold: 7 Start: 300079 End: 302548 |
| Description | glycosyl hydrolase 9B17 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 25 | 484 | 0 |
| DYSDALRKSILFFEGQRSGRLPKQQRMAWRGDSALNDGRNLNTDLVGGYYDAGDNVKFHFPMAFTATMLAWSSIDFGSYMSPNDFGHNLVALKWATDYLL KTVSQLPNRIFVHVGEAQPDHNCWERPEDMDTPRTAFALDAPLPASDLAGEITAALAAASIAFKQANPTYSKILLDKAIQTFQYADSHRGSYTDNPAVRQ AACPFYCSVNGYKDELLWGAAWLRRATGIDYYLTYLVNNRQAFGADFNYLEFGWDNKVGGVNVLIGKEVFQKNVSALAAYKDTAEKMMCAFLPETTGPHM SYTPGGLLYKHGGTQLQNTAALSFLLLTYADYLSSSSQQLSCGNLKFQPDSLRRIVKRQVDYVLGDNPMKLSYMVGYGEQYPREIHHRGSSIPSVTVHPN AIGCLPGWSIFHSPNPNPNILIGAVIGGPEEDDKFIGGRDHAEETEPTTYINAPFVGVFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 494 Download |
| MKPSIYFVTV FILVIVSLPT AIPHDYSDAL RKSILFFEGQ RSGRLPKQQR MAWRGDSALN 60 DGRNLNTDLV GGYYDAGDNV KFHFPMAFTA TMLAWSSIDF GSYMSPNDFG HNLVALKWAT 120 DYLLKTVSQL PNRIFVHVGE AQPDHNCWER PEDMDTPRTA FALDAPLPAS DLAGEITAAL 180 AAASIAFKQA NPTYSKILLD KAIQTFQYAD SHRGSYTDNP AVRQAACPFY CSVNGYKDEL 240 LWGAAWLRRA TGIDYYLTYL VNNRQAFGAD FNYLEFGWDN KVGGVNVLIG KEVFQKNVSA 300 LAAYKDTAEK MMCAFLPETT GPHMSYTPGG LLYKHGGTQL QNTAALSFLL LTYADYLSSS 360 SQQLSCGNLK FQPDSLRRIV KRQVDYVLGD NPMKLSYMVG YGEQYPREIH HRGSSIPSVT 420 VHPNAIGCLP GWSIFHSPNP NPNILIGAVI GGPEEDDKFI GGRDHAEETE PTTYINAPFV 480 GVFAYFKSNP NFA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00759 | Glyco_hydro_9 | 6.0e-159 | 25 | 484 | 467 | + Glycosyl hydrolase family 9. | ||
| PLN02613 | PLN02613 | 1.0e-159 | 25 | 484 | 463 | + endoglucanase | ||
| PLN03009 | PLN03009 | 0 | 3 | 493 | 493 | + cellulase | ||
| PLN02308 | PLN02308 | 0 | 4 | 493 | 492 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 19 | 486 | 468 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK28672.1 | 0 | 25 | 493 | 25 | 493 | unknown [Arabidopsis thaliana] |
| EMBL | CAB38821.1 | 0 | 24 | 490 | 6 | 472 | putative endo-1, 4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_195611.1 | 0 | 25 | 493 | 25 | 493 | AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_568050.1 | 0 | 24 | 490 | 28 | 494 | AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Swiss-Prot | Q9SVJ4 | 0 | 1 | 490 | 1 | 493 | GUN22_ARATH RecName: Full=Endoglucanase 22; AltName: Full=Endo-1,4-beta glucanase 22; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 22 | 484 | 1 | 426 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 1ksc_A | 0 | 22 | 484 | 1 | 426 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 1ks8_A | 0 | 22 | 484 | 1 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 25 | 484 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 25 | 484 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
