y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10006885m |
Family | CE8 |
Protein Properties | Length: 624 Molecular Weight: 69355.1 Isoelectric Point: 9.9422 |
Chromosome | Chromosome/Scaffold: 7 Start: 2663669 End: 2665747 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 310 | 606 | 0 |
ATVAKDGSGNFTTINDALKAMPAKYKGRYIIYVKHGVYDESVIVDKKKANVTMIGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAG PEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTIAP NEDLKPAKKTEFKSYLGRPWKKQSRTVVMESTIEDVIDPVGWLRWQETDFAVDTLFYGEYKNDGPSGATASRVKWPGFRVLKKEEAMKYTVGPFLQG |
Full Sequence |
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Protein Sequence Length: 624 Download |
MAFQDFDKIQ ERVNAERKRK FRKRIIFGIV SALVVVAAII GGGYAYVTYE NKSQDQGKTT 60 NNKTKESPSK SESPSQKPPT SAAQTASQKP PTSAAQTVKP NQVDKIIQTL CNSTLYKPVC 120 EKTLKNGTKT DTPLSDPRGL LKSAIVAVNE DLDRVFKKVV SLKTEKKDDK DAIAQCKLLV 180 DEAKEELGTS VKRINDTEAN NFGKVVPDLD SWLSAVMSYQ ETCVDGFEDG KLKTEIRKSF 240 NSSQVLTSNS LAMIKSIDGY LSPVPKLKTR HLLESRRSSA VEKDHSTSWL SNKERRMLKA 300 VDVKALKPNA TVAKDGSGNF TTINDALKAM PAKYKGRYII YVKHGVYDES VIVDKKKANV 360 TMIGDGSQKT IVTGNKSHAK KIRTFLTATF VAQGEGFMAQ SMGFRNTAGP EGHQAVAIRV 420 QSDRSVFLNC RFEGYQDTLY AYTHRQYYRS CVIVGTVDFI FGDAAAIFQN CDIFIRKGLP 480 GQKNTVTAQG RVDKFQTTGF VIHNCTIAPN EDLKPAKKTE FKSYLGRPWK KQSRTVVMES 540 TIEDVIDPVG WLRWQETDFA VDTLFYGEYK NDGPSGATAS RVKWPGFRVL KKEEAMKYTV 600 GPFLQGEWIH EIGSPVKFGL YDA* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 2.0e-145 | 133 | 621 | 499 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 1.0e-149 | 85 | 615 | 549 | + pectinesterase | ||
PLN02468 | PLN02468 | 7.0e-157 | 107 | 620 | 520 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 0 | 1 | 621 | 624 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 309 | 607 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC14494.1 | 0 | 119 | 623 | 3 | 496 | putative pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_195049.1 | 0 | 1 | 623 | 1 | 609 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_850077.1 | 0 | 1 | 623 | 1 | 614 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q7Y201 | 0 | 1 | 623 | 1 | 614 | PME13_ARATH RecName: Full=Probable pectinesterase/pectinesterase inhibitor 13; Includes: RecName: Full=Pectinesterase inhibitor 13; AltName: Full=Pectin methylesterase inhibitor 13; Includes: RecName: Full=Pectinesterase 13; Short=PE 13; AltName: Full=Pectin methylesterase 13; Short=AtPME13 |
RefSeq | XP_002324181.1 | 0 | 1 | 621 | 1 | 593 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 306 | 620 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 309 | 622 | 4 | 317 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 4e-25 | 309 | 608 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 4e-25 | 309 | 608 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 4e-25 | 309 | 608 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |