Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10007108m |
Family | GH35 |
Protein Properties | Length: 731 Molecular Weight: 81743 Isoelectric Point: 7.672 |
Chromosome | Chromosome/Scaffold: 7 Start: 5530266 End: 5534807 |
Description | beta-galactosidase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 38 | 339 | 0 |
IINGQRRILLSGSIHYPRSTPQMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGQYYFEDRYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKY VPGMVFRTDNEPFKAAMQKFTEKIVGMMKQEKLFETQGGPIILSQIENEYGPIEWEIGAPGKAYTKWAAEMAQGLSTGVPWIMCKQDDVPNSIINTCNGF YCENFKPNSDNKPKMWTENWTGWFTEFGGAVPYRPAEDIALSVARFIQNGGSFMNYYMYHGGTNFDRTAGEFVATSYDYDAPLDEYGLPREPKYSHLKKL HK |
Full Sequence |
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Protein Sequence Length: 731 Download |
MGLNARDKAW IFLGILLCCS SLICSVKAMV TYDHKAVIIN GQRRILLSGS IHYPRSTPQM 60 WPDLIQKAKD GGLDVIQTYV FWNGHEPSPG QYYFEDRYDL VKFIKLVQQA GLYVHLRIGP 120 YVCAEWNFGG FPVWLKYVPG MVFRTDNEPF KAAMQKFTEK IVGMMKQEKL FETQGGPIIL 180 SQIENEYGPI EWEIGAPGKA YTKWAAEMAQ GLSTGVPWIM CKQDDVPNSI INTCNGFYCE 240 NFKPNSDNKP KMWTENWTGW FTEFGGAVPY RPAEDIALSV ARFIQNGGSF MNYYMYHGGT 300 NFDRTAGEFV ATSYDYDAPL DEYGLPREPK YSHLKKLHKV IKLCEPALVS ADPTVTSLGD 360 KQEAHVFKSK SSCAAFLSNY NASSAARVSF GGSTYDLPPW SVSILPDCKT EYYNTAKVQV 420 RAPRIHMKMS PTNTQFSWES YNEEIPSAYD NGNFSHDGLV EQISITRDKT DYFWYMTDIT 480 ISPDETFLKT GEDPLLTIGS AGHALHVYVN GQLAGTAYGS LEQPKLTFSQ NIKLHAGVNK 540 LALLSTAAGL PNVGLHYETW NTGVLGPVTL KGVNSGTWDM SKWKWSYKIG TKGEALSIHT 600 VTGSSTVEWK AGPLVVEKQP LTWYKSTFDT PVGNEPLALD MNSMGKGQIW INGQNIGRHW 660 PAYTARGKCE RCSYAGTFTE KKCLSNCGEA SQRWYHVPRS WLKPTNNIVI VLEEWGGEPN 720 GISLVRRGAK * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0002 | 52 | 188 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 4.0e-22 | 30 | 340 | 361 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 8.0e-163 | 38 | 341 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 26 | 727 | 703 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK96780.1 | 0 | 1 | 727 | 1 | 723 | beta-galactosidase [Arabidopsis thaliana] |
EMBL | CAB39679.1 | 0 | 1 | 730 | 1 | 729 | putative beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_190852.2 | 0 | 1 | 730 | 1 | 727 | BGAL2 (beta-galactosidase 2); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | NP_849553.1 | 0 | 1 | 730 | 1 | 728 | BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
Swiss-Prot | Q9LFA6 | 0 | 1 | 730 | 1 | 727 | BGAL2_ARATH RecName: Full=Beta-galactosidase 2; Short=Lactase 2; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 9.99967e-42 | 38 | 337 | 16 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 8e-40 | 30 | 353 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 8e-40 | 30 | 353 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |