| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10007118m |
| Family | AA1 |
| Protein Properties | Length: 548 Molecular Weight: 62267.9 Isoelectric Point: 9.6208 |
| Chromosome | Chromosome/Scaffold: 7 Start: 4806275 End: 4808651 |
| Description | SKU5 similar 10 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 44 | 496 | 0 |
| LGILINGEFPGPEIRSLTNDSLVIHVHNDLDEPFLLSWNGVHMRKNSYQDGVFGTTCPIPPGKNYTYNFQVKDQIGSYYYFPSLDVQKAAGGYGSLRIYS LPHIPLPFPEPARDITLLIGNWYRRDHKTLKKILDKGRKLKTTPDGVLINGQGLSYVSTLTVEAGKTYRFRISNVGLQTCLNFEILGHQLKLIEVEGTHT VQSVYTSLDIHVGQTYSVLVTMDQPPHNYSIVASTRFIHVEHSMGVNLHYSNSKGLKIIHARRPEVDDVEWSIKQAQSIRTNLTAFGPSTDPQGDNHYGK MKISRTLILESSAALVKRRQRYAINGVSFVPADTPLKLADYFKIKDVFKVGSIPDKPRRGGEMRLDTSVMGADHNAFIEIIFQNREKIVQSYHLDGYNFW VVGINKGTWSKASRRGYNLKDAVSRSTTQVYPESWTAIYVALDNVGMWNLRSQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 548 Download |
| MGWWLHGGVW MMMTTTIIYF VNAGDTLYYN WRVTYGDITT RPSLGILING EFPGPEIRSL 60 TNDSLVIHVH NDLDEPFLLS WNGVHMRKNS YQDGVFGTTC PIPPGKNYTY NFQVKDQIGS 120 YYYFPSLDVQ KAAGGYGSLR IYSLPHIPLP FPEPARDITL LIGNWYRRDH KTLKKILDKG 180 RKLKTTPDGV LINGQGLSYV STLTVEAGKT YRFRISNVGL QTCLNFEILG HQLKLIEVEG 240 THTVQSVYTS LDIHVGQTYS VLVTMDQPPH NYSIVASTRF IHVEHSMGVN LHYSNSKGLK 300 IIHARRPEVD DVEWSIKQAQ SIRTNLTAFG PSTDPQGDNH YGKMKISRTL ILESSAALVK 360 RRQRYAINGV SFVPADTPLK LADYFKIKDV FKVGSIPDKP RRGGEMRLDT SVMGADHNAF 420 IEIIFQNREK IVQSYHLDGY NFWVVGINKG TWSKASRRGY NLKDAVSRST TQVYPESWTA 480 IYVALDNVGM WNLRSQFWPR QYLGQQFYLR VHSPGHSHKD EFPLPKNVLL CGRASNRTQD 540 YHHSVDP* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02792 | PLN02792 | 0 | 11 | 537 | 529 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 17 | 547 | 536 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 18 | 537 | 523 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 8 | 532 | 534 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 29 | 535 | 523 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB37498.1 | 0 | 1 | 537 | 1 | 544 | putative pectinesterase [Arabidopsis thaliana] |
| RefSeq | NP_194538.1 | 0 | 1 | 537 | 1 | 540 | sks10 (SKU5 Similar 10); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_195555.2 | 0 | 1 | 537 | 1 | 545 | sks9 (SKU5 Similar 9); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002282214.1 | 0 | 6 | 537 | 4 | 537 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002528421.1 | 0 | 17 | 538 | 19 | 540 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 532 | 5 | 539 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1asq_A | 0 | 28 | 532 | 5 | 539 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1asp_B | 0 | 28 | 532 | 5 | 539 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1asp_A | 0 | 28 | 532 | 5 | 539 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1aso_B | 0 | 28 | 532 | 5 | 539 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
